PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00831.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 341aa    MW: 39460.9 Da    PI: 4.5592
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00831.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.82.2e-111253445
                      -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
            SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                       n+  r  tf kR++g++ K + L +LCd+ +++iif  + +
  Migut.N00831.1.p 12 RNEKSRRLTFKKRKHGLINKLHQLTTLCDVTACMIIFDDNSN 53
                      5888999*****************************987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006619.021156IPR002100Transcription factor, MADS-box
SuperFamilySSF554556.15E-18174IPR002100Transcription factor, MADS-box
SMARTSM004321.2E-15162IPR002100Transcription factor, MADS-box
CDDcd002666.50E-19277No hitNo description
PRINTSPR004042.4E-11323IPR002100Transcription factor, MADS-box
PfamPF003191.9E-131255IPR002100Transcription factor, MADS-box
PRINTSPR004042.4E-112338IPR002100Transcription factor, MADS-box
PRINTSPR004042.4E-113859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MGRGKLKLEL MRNEKSRRLT FKKRKHGLIN KLHQLTTLCD VTACMIIFDD NSNYHEPEIW  60
PRDPEKVRRI VESYDSPKSV STFGLSDFFR DRTKTVDEEL KKLRKSNLES KFPIRQEFLD  120
SLTESQLREF GDALKNKARI AKSRIEFLKN QESTMKQEFS STLLDYPPPP DFGNLDRNQE  180
TASSSSSVMN QNNSVVMMDF AHAPKRFGLD EDFCTWNNIH DQETDFATNN NHQNNSVVMM  240
MDFDPEILGF DPARDLSAWD FDEQEIDSCL KEISDDATNF DDRHYCGPSS DIMIPQHYYT  300
AAAPVVVEDV VLPPQLQYWE NDGGDQEEDI LQFFDGSFWS *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00831.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849863.10.0PREDICTED: agamous-like MADS-box protein AGL80
TrEMBLA0A022R0Z20.0A0A022R0Z2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24572253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31630.12e-19AGAMOUS-like 86