PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01582.1.p
Common NameMIMGU_mgv1a023131mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 379aa    MW: 41833.1 Da    PI: 8.4913
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01582.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.00053131152223
                       EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                       +C+ Cg+ F +  +L  H+r+H
  Migut.M01582.1.p 131 TCSLCGRGFLSMKSLFGHMRSH 152
                       6********************9 PP
2zf-C2H214.78.7e-05279301123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ykC+ C +sF+++  L  H+++H
  Migut.M01582.1.p 279 YKCSSCERSFTTHQALGGHMSSH 301
                       9********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.316385IPR015880Zinc finger, C2H2-like
PfamPF139126.4E-86385IPR007087Zinc finger, C2H2
SuperFamilySSF576672.23E-76485No hitNo description
PROSITE patternPS0002806585IPR007087Zinc finger, C2H2
SuperFamilySSF576672.23E-7125152No hitNo description
SMARTSM003550.091130152IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.993130157IPR007087Zinc finger, C2H2
PfamPF139125.6E-5132152IPR007087Zinc finger, C2H2
PROSITE patternPS000280132152IPR007087Zinc finger, C2H2
SuperFamilySSF576672.29E-5278305No hitNo description
PROSITE profilePS5015710.887279306IPR007087Zinc finger, C2H2
SMARTSM003550.025279301IPR015880Zinc finger, C2H2-like
PfamPF139121.9E-7279302IPR007087Zinc finger, C2H2
PROSITE patternPS000280281301IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MANEQENEAE SLPVKKNKQK SDLLHLWVNL KIPKQEQQQE ERGADIIIED DQTIGCKNNT  60
TARVCSICQA TFGSGKALGG HMRVHFRRAA AAANKKQNPK LQPPTTTTFK KEKKKKIASD  120
QNQKLPVKKP TCSLCGRGFL SMKSLFGHMR SHPNREWRGI HPPSNASVDL TGSLSGWAVT  180
ARRGRQAAST ASSSEVSTSD EDHQLHQAAA CLMMLSQSGG EKPETAKNHV FEKEVVEEEE  240
ARTKRKRKKV KLCDLVPPLM DDDDKKKVAV AAAVVVDKYK CSSCERSFTT HQALGGHMSS  300
HNRSNHNNNI NLIINNNNNN ISMLAKNEDL VCNDYPYPQV VEEETTNKGG GLSSNVVMEF  360
DLNEAPPPSD DGEFCSSW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1244248RKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01582.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848636.10.0PREDICTED: zinc finger protein ZAT1-like
TrEMBLA0A022QM150.0A0A022QM15_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20502263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26940.18e-15C2H2 family protein