PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01479.1.p
Common NameLOC105968429, MIMGU_mgv1a010952mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 297aa    MW: 32579.4 Da    PI: 5.9219
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01479.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1084.9e-341973155
           G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                      k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Migut.M01479.1.p 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 73
                      79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.4851676IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.0E-321874IPR009057Homeodomain-like
SuperFamilySSF466897.17E-181873IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-251974IPR006447Myb domain, plants
PfamPF002491.1E-92172IPR001005SANT/Myb domain
PfamPF143791.5E-23105151IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MDPISGANNM SSNSNLASKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT  60
IYHVKSHLQK YRLAKYLPDS SSDGKKAENK ESGDILSGLD GSSGMQITEA LKLQMEVQKR  120
LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ RLSGVLPEAP GTEDNKICPE SDNKTDPATP  180
APTSESPFSD KPPKEHTLVK SLSLDESFSS HHHEPLTPDS DCHVTSPVEA PTSDDVAFAK  240
SEMVNLGHSI LESSLSPCYN QQQQHSVFLT RQQFDCSMEV PAGGENTMEK VSGGNV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-241976259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01479.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR0924281e-54KR092428.1 Tectona grandis MYB transcription factor 1 (MYB1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848512.10.0PREDICTED: protein PHR1-LIKE 1-like isoform X2
SwissprotQ9SJW01e-122PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A022QK210.0A0A022QK21_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.14e-94G2-like family protein