PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01435.2.p
Common NameLOC105969060, MIMGU_mgv1a002245mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family FAR1
Protein Properties Length: 693aa    MW: 80362.8 Da    PI: 6.6686
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01435.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.63.2e-2164155190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 
                       ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++  +kk+  +++r+r++ r+gC+ k+ ++ke     ++w+v ++++ HnHel 
  Migut.M01435.2.p  64 DYYGNFARKNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPARKKQIGEHQRERKSVRCGCDSKMYLSKEIvdgVSQWYVVQFSNVHNHELL 155
                       59********************8888.******************************************998767789*************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.0E-1964155IPR004330FAR1 DNA binding domain
PfamPF105511.9E-20287379IPR018289MULE transposase domain
PROSITE profilePS5096610.138559594IPR007527Zinc finger, SWIM-type
PfamPF044347.6E-8566593IPR007527Zinc finger, SWIM-type
SMARTSM005751.5E-4569596IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    Send to blast
MSKTVWIKRQ QCPCGDWKCF VTYEGDTNET NVGSRLIKND SFPTETMISP YVGMVFKSDD  60
EAFDYYGNFA RKNGFSIRKE RSRLSPQLGV YKRDFVCYRS GFAPARKKQI GEHQRERKSV  120
RCGCDSKMYL SKEIVDGVSQ WYVVQFSNVH NHELLEDDQV RLLPAYRKIH EADQERILLL  180
SKAGFPIHRI VKVLELEKGI QGGHLSFLER DVRNFIQTRK RIVQESDALL AERREIDTVD  240
LLEACRTSKE ADPYFVYDVA FDENDRVENV AWSCGDSVHA YDMFGDVVYF DSTYRSMNYG  300
LSFGAWLGIN NHGKILFFGC ALLQDENPRS FAWALQAFLR FMKGRCPQTI ITDIDPGLRE  360
AITSELPNTK HFISLYNMMP RISTWFSLPL GPRFPEFKYE FEELCRLKGT DEFEFRWNNM  420
VSHFGINSDK HIALLFSLRM CWALPYTRGC FLARMDSTSY WKSVDVFLKG VIETQTCLRG  480
FLEQMGLVSH CKMQSHEEAQ FMHLKTCLPI EEHARSILTP FAFNAVQQEM VLAMEYAASE  540
MSDGSHIVRH FKKVDGEHLV IWVPEDEQIH CSCKAFESTG ILCRHALRVL LLKNYFQIPS  600
KYLLNRWRQE ESSSVLRYGE QSNLKNSDEW YREFNLLTGT LFSEAALTKE RSDFVRRELT  660
EELTRLVGQV REMPAVDEVG MDIITLSPTN VL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01435.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849242.10.0PREDICTED: putative protein FAR1-RELATED SEQUENCE 10 isoform X2
SwissprotQ9LKR40.0FRS10_ARATH; Putative protein FAR1-RELATED SEQUENCE 10
TrEMBLA0A022QJC30.0A0A022QJC3_ERYGU; Uncharacterized protein
STRINGMigut.M01435.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.10.0FAR1-related sequence 10
Publications ? help Back to Top
  1. Joly-Lopez Z, et al.
    Abiotic Stress Phenotypes Are Associated with Conserved Genes Derived from Transposable Elements.
    Front Plant Sci, 2017. 8: p. 2027
    [PMID:29250089]