PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01256.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 195aa    MW: 22585.9 Da    PI: 5.7114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01256.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-102466754
                      HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      e+ErrRR+++N++  eLr+l+P       + ++Ka+i + A+ YI +L
  Migut.M01256.1.p 24 EAERRRRKKLNDRQLELRSLVPII-----TNMNKATIITDAIAYIEEL 66
                      89*********************6.....58**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.77E-151781IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.7891766IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-112372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-82366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.43E-82471No hitNo description
Gene3DG3DSA:4.10.280.101.4E-132481IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MDKRKKIDQE DNSIDREFIS KNLEAERRRR KKLNDRQLEL RSLVPIITNM NKATIITDAI  60
AYIEELRNSV EELTDQILQM EATDEDRNTK FEDININDDD HQMKLAHQPE VEVNHICGTK  120
IWIKIIVQKK RGRLTKLMEA ISVIGFHLTD ICITTSQEAI LFTSSAEGVH GGVQDADQIK  180
KFLLEIIRRE INYI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12532ERRRRKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01256.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848435.11e-134PREDICTED: transcription factor DYT1-like
TrEMBLA0A022QGL21e-116A0A022QGL2_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.M01256.1.p1e-138(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91071622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-40bHLH family protein