PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01246.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 408aa    MW: 45219.6 Da    PI: 5.079
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01246.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171.1e-053033401254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Migut.M01246.1.p 303 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 340
                       677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973291340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.89E-6301344No hitNo description
SuperFamilySSF474593.93E-12301357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0041302346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-9305348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MAEELFHGGV CGGGANWWNN STRNTYSSSS LCSSLANRDL TTTNMKSNTR SSDADSASDG  60
SCSSTVVIQD VLKPNQTLQM VGISPDDHWI NNQDLLHNNG RSDQNYSNIL DSSMNYWQEN  120
DWISATSNLT SQDSNSVINS LNQTFDQLNS SNGFPLMNSA SYSSYDSSLL QTLFDETDSN  180
ALRTQQSLLD NREFNYSSSA ENYQVNSNEF LPMENPSFAK QQQLWNSTAA DLSTNDVRSS  240
FLPSSSQSQF LPSSVHCKKP NLPSFSVKHQ NEEASVPKKA SNEPSFKRPR IETPSPLPTF  300
KVRKEKLGDR ITALQQLVSP FGKTDTASVL HEAIEYIKFL HDQVNELSSP YLKHRPSPVQ  360
RLQAEDKEGV MQDLKTRGLC LVPVTSTFPV AQTPADFWTP TFGGSFK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01246.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1472306e-42EF147230.1 Populus trichocarpa clone WS01229_K02 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849357.10.0PREDICTED: transcription factor bHLH112-like
TrEMBLA0A022QJW20.0A0A022QJW2_ERYGU; Uncharacterized protein
STRINGMigut.M01246.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8602486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.15e-50bHLH family protein