PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01136.1.p | ||||||||
Common Name | LOC105968811, MIMGU_mgv1a013945mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 206aa MW: 22836.7 Da PI: 7.0441 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.5 | 3.8e-11 | 15 | 63 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +E++RR+++++ +++L +l+P + +p + +s + Le A +YI++Lq Migut.M01136.1.p 15 RKTIEKNRRNQMKDLYNKLTSLVPRP--NPRELVSLPDQLEGAANYIQKLQ 63 5789*********************7..37777*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.15E-6 | 8 | 67 | No hit | No description |
SuperFamily | SSF47459 | 3.79E-12 | 8 | 80 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.747 | 10 | 62 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.5E-11 | 12 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.9E-4 | 16 | 68 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.5E-7 | 16 | 63 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MEPQNPSSSS FKADRKTIEK NRRNQMKDLY NKLTSLVPRP NPRELVSLPD QLEGAANYIQ 60 KLQHDLEKMK QKKNCLLMGT VSANSTTTTA TTTTTTNKSS ISNTDNNNNN NGGINLPDID 120 VRVTGSALEV VVITGQNSHF MFSEIIRMLH EEEGAEVVNA SFSMLQDSVF HTLHCKIGEC 180 LVQDYDGAAA ARISEKLRKF VYEVN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01136.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012848938.1 | 1e-153 | PREDICTED: transcription factor bHLH125 | ||||
TrEMBL | A0A022QK96 | 1e-151 | A0A022QK96_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01136.1.p | 1e-152 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5105 | 21 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-42 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01136.1.p |
Entrez Gene | 105968811 |