PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01093.1.p | ||||||||
Common Name | MIMGU_mgv1a005469mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | VOZ | ||||||||
Protein Properties | Length: 484aa MW: 53607.7 Da PI: 5.832 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 412 | 1.1e-126 | 207 | 425 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 pppsaflgpkcalwdc+rpa g +w q dycs +ha la neg pg pv+rp+gi+lkd+llfaal ak+qgk+vg+pecegaatakspw Migut.M01093.1.p 207 PPPSAFLGPKCALWDCPRPALGLDWSQksdDYCSIYHAGLAPNEGYPGSPPVVRPGGIGLKDNLLFAALGAKAQGKDVGVPECEGAATAKSPW 299 89**********************9865559************************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalaly 183 na+elfdl++l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein+++a+aly Migut.M01093.1.p 300 NAPELFDLTVLDGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPMENFEWHLYEYEINQYNACALY 392 ********************************************************************************************* PP VOZ 184 rlelklvdekksakgkvskdsladlqkklgrlta 217 rle+k vd+kk++kgk +ds+adlqk++grlta Migut.M01093.1.p 393 RLEVKRVDGKKTPKGKC-NDSVADLQKQMGRLTA 425 ****************6.69************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 484 aa Download sequence Send to blast |
MMKGSKSGAC KSASHHLYKD RAKNRVDDLQ GMFSDLQSAR KESRTMDVSV LEEQVNQMLR 60 EWKSELNEPS PASSLQQGGS LGFSSEIHRL LHLCDEEDDA TSALAAPKPD PDEKKVVNGS 120 TSQEAFNMSN GPQEQGFHLV DQCKSSGMGV NNMGTDNNMS LPTQLDYHSY HTNQPFEQQY 180 YFGFDGTELV GEDGLPQSTG YQHNISPPPS AFLGPKCALW DCPRPALGLD WSQKSDDYCS 240 IYHAGLAPNE GYPGSPPVVR PGGIGLKDNL LFAALGAKAQ GKDVGVPECE GAATAKSPWN 300 APELFDLTVL DGETIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVMNEFGGL 360 KRSYYMDPQP MENFEWHLYE YEINQYNACA LYRLEVKRVD GKKTPKGKCN DSVADLQKQM 420 GRLTAEFPIE KQKNEKQKSV KGRGKNNSKA SNNALAANPG KGVVVDNTPC DYLVDDVGGY 480 YLT* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01093.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012849067.1 | 0.0 | PREDICTED: transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A022QJB3 | 0.0 | A0A022QJB3_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01093.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01093.1.p |
Publications ? help Back to Top | |||
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