PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01003.1.p
Common NameMIMGU_mgv1a019472mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 327aa    MW: 36975.5 Da    PI: 4.6579
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind93.91.8e-29481402103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k++e+++d++++++isw+++g++f+++d+++f+++ Lp+ F+++n++SF+ QLn YgFkkv  e+          e++++ F++gkk+ll
  Migut.M01003.1.p  48 FLVKTFEVVDDPQTNSIISWNSTGTTFIIWDHNKFSSEFLPRLFRTNNLSSFIYQLNNYGFKKVCWER---------YEYENQLFQAGKKHLL 131
                       9****************************************************************999.........78************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                       ++ikr++++
  Migut.M01003.1.p 132 KDIKRRNQQ 140
                       ******986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467851.18E-2744137IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004152.5E-3744137IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.102.2E-2945137IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004475.1E-2648137IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.5E-144871IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.5E-148698IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.5E-1499111IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MDFETAQMLK STQTENASPG GGVGGVVGGD EVVSETGQQW GLRPPPPFLV KTFEVVDDPQ  60
TNSIISWNST GTTFIIWDHN KFSSEFLPRL FRTNNLSSFI YQLNNYGFKK VCWERYEYEN  120
QLFQAGKKHL LKDIKRRNQQ PQLGKRKRAH FATDDNLTND AMKTKLEAVM NEQKDVKFKI  180
KKLGETLEKM KEQLANMEKN TRDEDIEEGG GKIGDFLKQF MQCINDSEKA RLDGSSSTGL  240
TVELEEKEVK EKSPEEDAEN SGFWKNVMEN VEQGGDGEGV LAPHHSKAIV ELEEMMASDV  300
AMQKEVMTAK PYDLNVEEDG LLELWT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B4e-194613727129Heat shock factor protein 1
5d5v_B4e-194613727129Heat shock factor protein 1
5d5v_D4e-194613727129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130136LKDIKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01003.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848889.10.0PREDICTED: heat stress transcription factor A-7a-like
TrEMBLA0A022QJJ60.0A0A022QJJ6_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.M01003.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA129701518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51910.11e-36heat shock transcription factor A7A