PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00145.3.p
Common NameLOC105967397, MIMGU_mgv1a008926mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 359aa    MW: 39326.6 Da    PI: 7.9663
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00145.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.92e-27103156256
           G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                        +++WtpeLH++Fv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++
  Migut.M00145.3.p 103 GKVDWTPELHKQFVQAVEQL-GVDKAVPSKILELMGIDCLTRHNIASHLQKYRSH 156
                       5899****************.********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.94199158IPR017930Myb domain
SuperFamilySSF466894.3E-19100159IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-26100159IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-25102156IPR006447Myb domain, plants
PfamPF002497.8E-9105154IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MDPKISAEFS TSSCEEKEMI ASSTTSVQLD KVHEENNCIK EEKSPSDSAL ASASNLGSGT  60
SLIQGDETVS KAEGTVVNPS FSKADKARRS SLHLNSPSGK RKGKVDWTPE LHKQFVQAVE  120
QLGVDKAVPS KILELMGIDC LTRHNIASHL QKYRSHRKHM LAREAEAATY SRKRHIYGTT  180
GKTEKSNVNS WVVPTTRFPP VTSAPSFRPL HVWGHPSTDQ SLVYMWPTHT ASLPSPPSWA  240
PPHHVDPSFC YYHPHLQEVP VPGMPCFPQH FPPARFPPTY THSVAPSIGV PIAPTEQTVP  300
QLPFDSHQQS KESIDAVIGD VLSKPWLPLP LGLKPPSIDS VMMELQHQGV SKIPPSCA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-1698154157ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00145.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847450.10.0PREDICTED: probable transcription factor GLK1 isoform X3
TrEMBLA0A022QJU00.0A0A022QJU0_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20570.11e-66GBF's pro-rich region-interacting factor 1