PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L02017.1.p | ||||||||
Common Name | MIMGU_mgv1a019089mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | G2-like | ||||||||
Protein Properties | Length: 264aa MW: 29974.9 Da PI: 7.7825 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 83.6 | 2.1e-26 | 11 | 65 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+q+GG+++AtP+ il++m ++ Lt+ hvkSHLQkYR+ Migut.L02017.1.p 11 KERLKWTKELHDLFEKAVHQIGGPDRATPRGILRAMAIPELTILHVKSHLQKYRM 65 68****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.5E-25 | 8 | 66 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.15E-15 | 10 | 65 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.4E-22 | 11 | 65 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.2E-7 | 13 | 64 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.8E-18 | 98 | 141 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MGSNRCNNSS KERLKWTKEL HDLFEKAVHQ IGGPDRATPR GILRAMAIPE LTILHVKSHL 60 QKYRMSVFTR EEDHVGGKFE KTSASEMLPN FSAISSAQLN EALLIQMEAQ RRLSDQLEVQ 120 KSLKTKIEAQ GRYLDKIMDE YKNRAPGTKP VKPYSPILSM PSLSEESDQS NIGKEFESDS 180 EVMSKDEFRA QKRIKIQDDV ILPHVHKHSG FFNPAGSHHQ SLSMFCVDGL DNNIYTEQEI 240 SFPWSVSAFQ SQLLPRIYNP SNQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-16 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L02017.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077547.1 | 1e-140 | myb family transcription factor PHL7 | ||||
Refseq | XP_011077550.1 | 1e-140 | myb family transcription factor PHL7 | ||||
Refseq | XP_020549678.1 | 1e-140 | myb family transcription factor PHL7 | ||||
TrEMBL | A0A022QJI3 | 0.0 | A0A022QJI3_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10101 | 20 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 6e-46 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.L02017.1.p |