PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01754.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 377aa    MW: 42656.1 Da    PI: 5.8895
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01754.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.31.4e-34681602103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k++++++d++l+++isw ++ nsfvv+d+ efa+ +Lp++Fkh+nf+SFvRQLn+YgF+k+++++         weF+ + F +g+++ll
  Migut.L01754.1.p  68 FLGKTFDLVDDPSLDSIISWGKKDNSFVVWDPIEFARMILPRHFKHRNFSSFVRQLNTYGFRKIDTDK---------WEFASEGFVRGQRHLL 151
                       99***************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                       ++i+r+ks+
  Migut.L01754.1.p 152 KNIQRRKSS 160
                       ******997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467851.01E-3464157IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004157.6E-5664157IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.102.7E-3665157IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004472.1E-3068157IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.5E-176891IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.5E-17106118IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340107131IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.5E-17119131IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MDSDDNQKIH TPLSFPLPSS MASAFPEPPF SPFLGFGCFE PEFESKPEGL RALPHPLESL  60
YETPIPPFLG KTFDLVDDPS LDSIISWGKK DNSFVVWDPI EFARMILPRH FKHRNFSSFV  120
RQLNTYGFRK IDTDKWEFAS EGFVRGQRHL LKNIQRRKSS QPQQQIGSSS GEEGKAAALE  180
GEIERLRRER SSMMREVIEL QHQQRGTVER METVNEKLHT AEKRQKQMVS FLGKIFKNPS  240
LLSRIGQTRG QKSITTPKTM RKFVKHQGSE PIGENKVSGT KDVSFEVEDF AQDHYLKGKA  300
VLGPLPESMP EYFISFPDDV AKEKAAAASM TEVEDAIWSK GFESGAGIGS STNEFWSDVD  360
VWDIPLQADE GYPFNE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A2e-246516017123Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184189RLRRER
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01754.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836096.10.0PREDICTED: heat stress transcription factor A-3
TrEMBLA0A022RE100.0A0A022RE10_ERYGU; Uncharacterized protein
STRINGMigut.L01754.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87272025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.11e-75heat shock transcription factor A3