PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01708.1.p
Common NameLOC105956707, MIMGU_mgv1a010271mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 318aa    MW: 35297.5 Da    PI: 8.0991
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01708.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.61.9e-151462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd  l++++++ G+g +W + ++++g++R++k+c++rw++yl
  Migut.L01708.1.p 14 KGPWSPEEDATLKNYIEKNGTGgNWIALPHKIGLKRCGKSCRLRWLNYL 62
                      79*********************************************97 PP
2Myb_DNA-binding37.36.3e-1269111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g ++++Ed ++  +++  G++ W+ Ia  ++ gRt++++k++w++
  Migut.L01708.1.p  69 GEFSEDEDTIICTLFATIGSR-WSIIAGQLP-GRTDNDIKNYWNT 111
                       789******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.529962IPR017930Myb domain
SuperFamilySSF466894.6E-2612109IPR009057Homeodomain-like
SMARTSM007177.5E-121364IPR001005SANT/Myb domain
PfamPF002491.0E-141462IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.9E-231569IPR009057Homeodomain-like
CDDcd001674.01E-91662No hitNo description
PROSITE profilePS5129420.68463117IPR017930Myb domain
SMARTSM007173.8E-1167115IPR001005SANT/Myb domain
PfamPF002491.3E-1069111IPR001005SANT/Myb domain
CDDcd001677.16E-870113No hitNo description
Gene3DG3DSA:1.10.10.601.7E-2270118IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009785Biological Processblue light signaling pathway
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MGRAPCCDKS KVKKGPWSPE EDATLKNYIE KNGTGGNWIA LPHKIGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSEDEDTIIC TLFATIGSRW SIIAGQLPGR TDNDIKNYWN TKLKKKLIAS  120
VAPPPPNNYH HHQKKHHNHQ IITNFSSQPS INSSSFMIGS SYPSINCTQL PFYNKNDAVF  180
ASNADGLVGH VQGNYYLNYN QISGGPSCSS SDGSCITNNQ ISCRNGKGLV EPDYNRFLQS  240
LLLSNNGVLS DDTKFMISGS SNYISDGCFV GDQNPVDHSI EEIKQLISST NTNINSSNSL  300
NFFVDEIKTE DKLLFDY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-23141177108B-MYB
1mse_C3e-23141174105C-Myb DNA-Binding Domain
1msf_C3e-23141174105C-Myb DNA-Binding Domain
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01708.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836040.10.0PREDICTED: transcription factor RAX2
TrEMBLA0A022RDX00.0A0A022RDX0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.12e-74myb domain protein 84