PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01050.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 1220aa    MW: 139145 Da    PI: 8.3886
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.00035107711363154
                        .......................................TTS-STCHHHHHHHHHHHHHH CS
               HLH   31 s....................................kapskKlsKaeiLekAveYIksL 54  
                        +                                    ++++k+ + a++L  A+eYIk L
  Migut.K01050.1.p 1077 PfrsktqkqengvvncgrdegkdqqqqrsgsrerggsGGGGKRTDTASVLSDAIEYIKFL 1136
                        0555555566666666666666666666666777774556666***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147983.39E-73145No hitNo description
SuperFamilySSF525407.48E-65167426IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009319.8E-79183454IPR002182NB-ARC
Gene3DG3DSA:3.40.50.3003.8E-14185339IPR027417P-loop containing nucleoside triphosphate hydrolase
PRINTSPR003641.7E-17197212No hitNo description
PRINTSPR003641.7E-17270284No hitNo description
PRINTSPR003641.7E-17362376No hitNo description
SuperFamilySSF520585.21E-22492507IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520585.21E-22538872IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.108.6E-10601669IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.108.6E-10730878IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003641.7E-17786802No hitNo description
SuperFamilySSF520585.21E-22967993IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF474592.14E-610201039IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-610231038IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-611161141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.14E-611171150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006952Biological Processdefense response
GO:0043531Molecular FunctionADP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1220 aa     Download sequence    Send to blast
MAAYAALVSV LTIIDQIQNH PRFSISFDKN QIESLGEKVG FLLDFIETDT HGVIIEHARV  60
LERRIASAAY AAEDVIESHV VDQIQAAGSV EGHRLRKVVK DIMLSMRLKK ARMEENHASS  120
ISMLDLEKVI EDMDSIKKKV MEFRDESGSN EHDMQPTSTT SSSTPRITTD KNTMVGFDEQ  180
LISLLDKLTG QRSNRQIIPI VGMGGIGKTT LAKNAYEHSL IAHHFDIRTW VTISQKYNVK  240
ELLLQLLSMI SSEIDSEHDE QLLGQKLHKI LWGRRYLIVI DDIWGIEAWD NVNLFFPENN  300
NGSRIVVTTR ISNVATHFDS SLFELSFLDE NKSWDLFCKK TFGEAGCPLE LEDIGKEIVK  360
KCKGLPLSIT VIGGLLGRSH MTQKYWKNIA KDLTSFLNSG EDENCSNILS LSYTYLPAHL  420
KPCFLYMAIF PEDHKILVSR LTKLWVAEGF IKSNESQSSE EIARGYINDL IDRNLILKHT  480
MGSNGNVKNC VIHDLVRDLC LMVAQKEEFI CVIEDIPRGT ERGRRIVCDK KIRQVRYPFS  540
VFHTVRLAPR TSTWVTSRDG RTFRALRPLR LAPLTRTWVT SIDGRLSNNR LLRVMSSNSE  600
AKKTDLRRHI VDHVNMRYLA CTNFKLSSAF VLPSSINIVW SLQTIIIRGK IEAPSQIWEM  660
RQLRHVDIYR LCLPNSPWSY GHKQDECVLP NLQTLKKVVN FTWSKEAYKR VVNVRKLNIV  720
YDDEWEWSNN NDYCLHNICQ LHKLESLSCL SYCGDERLRK LTFPSSLKKL KLDGFMLGYE  780
DLTVIGSLPC LEVLKLRNNS IIAREWNPVD GEFLRLKSLL IYGSGLVNWN ADTSNFPVLE  840
KLVLEYMDKL DGIPLDIGEI PTLRHIELNV CNESAIISAM KIAEEQEDAG NDILQVRVEF  900
RFEYELQLFQ EKMKQSADHS FTRNNFQVVA RNMVFRRRRR RFVRRHRPSC QRHFPPHSSS  960
NCRPLPVFDH IRLGLLRNCR CPPLSSNSIS VMVLILNNLF NLIYFIRVIH DDNYEHVDPV  1020
RKEKMGDRIT ALQQLVSPFG KPQISHLLLQ IITIAGAIVI TGIGLFTDAL SLLSSPPFRS  1080
KTQKQENGVV NCGRDEGKDQ QQQRSGSRER GGSGGGGKRT DTASVLSDAI EYIKFLHEQI  1140
SFVRPQQFAY ETLSHLPVKI LYTPSKVFPL GILRVSSSVF YNTVPHSCTP LDCTGYLICS  1200
YYEACGCTST VVAVYFVTM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6s2p_N6e-761705076347NRC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1935943RRRRRRFVR
211091117RGGSGGGGK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01050.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848186.10.0PREDICTED: putative late blight resistance protein homolog R1B-17
RefseqXP_012848187.10.0PREDICTED: putative late blight resistance protein homolog R1B-17
RefseqXP_012848188.10.0PREDICTED: putative late blight resistance protein homolog R1B-17
TrEMBLA0A022QKM70.0A0A022QKM7_ERYGU; Uncharacterized protein
STRINGMigut.K01050.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA744
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05170.15e-07bHLH family protein