PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00930.1.p
Common NameMIMGU_mgv1a024028mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 358aa    MW: 38743.4 Da    PI: 5.2325
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00930.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.53.1e-171759345
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                      ien+   + tfskRr g+ KKA+ELS+LC++++ +iifs+t++
  Migut.K00930.1.p 17 IENQDDLYATFSKRRLGLYKKASELSTLCGVDIGIIIFSPTDN 59
                      999999*********************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006621.278767IPR002100Transcription factor, MADS-box
SuperFamilySSF554551.44E-23779IPR002100Transcription factor, MADS-box
SMARTSM004323.5E-23766IPR002100Transcription factor, MADS-box
CDDcd002654.61E-30879No hitNo description
PRINTSPR004042.4E-13929IPR002100Transcription factor, MADS-box
PfamPF003198.9E-211763IPR002100Transcription factor, MADS-box
PRINTSPR004042.4E-132944IPR002100Transcription factor, MADS-box
PRINTSPR004042.4E-134465IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MAGRQTRGRQ RIPIRLIENQ DDLYATFSKR RLGLYKKASE LSTLCGVDIG IIIFSPTDNP  60
FSFFHPSMES VIDRFRNPNQ PLSDYARVVE AHTRARIDNL NRRLDEIHEE KDRLKEREKE  120
LDEIDRNRPK GWWEETPIES LSPEQVQEWK AWFRAFKVKI QNRISELNNI GASTSGAAAA  180
DAAAVPPPPT GGEIVPGMFA QNYDFPPGPS SSSDSPVAFG DHQFATTQYY NAPPYTTGGA  240
SGSGGGGQYF VTQAGEGPSG SGSGQFSVPY NFGAPTFGAE GSSAAAAAGG SGGGGQFPPM  300
QYNYFPPPPQ QSDHDNQNQD PTSATVGEYS IQYNYIPRWG QDPSSGGGAG PSHRGNI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00930.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838634.10.0PREDICTED: uncharacterized protein LOC105959133
TrEMBLA0A022S1J20.0A0A022S1J2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38220138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-28AGAMOUS-like 61