PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00763.1.p
Common NameLOC105955899, MIMGU_mgv1a005357mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 488aa    MW: 55195.8 Da    PI: 5.8204
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00763.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.68e-17136226199
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       f+k l++s+v++  ++ lp +f++ h       +++ +tle+e+g+++ +k+i  k++    l++GW++Fv  n+L egD+++F+l+++ +  
  Migut.K00763.1.p 136 FLKFLVRSHVGSCFWMGLPVPFCKLHlpF----KDTIVTLENENGEEFPIKYIAHKTG----LSAGWRKFVGGNKLLEGDVLIFHLIETCRL- 219
                       89*********************999532....4568***************655555....************************985555. PP

                       .EEEEE-S CS
                B3  92 lvvkvfrk 99 
                        +v v+r+
  Migut.K00763.1.p 220 -KVYVIRA 226
                       .8888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.105.1E-19128227IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.79E-22130227IPR015300DNA-binding pseudobarrel domain
CDDcd100171.64E-23134225No hitNo description
PfamPF023625.9E-15136226IPR003340B3 DNA binding domain
PROSITE profilePS5086312.689136227IPR003340B3 DNA binding domain
SMARTSM010191.2E-19136227IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MKLKIVHQSQ ENHAAEEEQI KNETMEIDQI ETHKIRVLVE DDENPSPINP PPISAYDPML  60
VSGKRKRKPK EMIDEAPSVF RRRRKFSSSS SSSKYKDATL DSGGTSMSMG GPHSKSPTMI  120
RAEEVQSSLG NDHPSFLKFL VRSHVGSCFW MGLPVPFCKL HLPFKDTIVT LENENGEEFP  180
IKYIAHKTGL SAGWRKFVGG NKLLEGDVLI FHLIETCRLK VYVIRANDLT EVDGALSLLI  240
LDSQTKQSDA EMAIDAQIKK QRRQKSLPLT IVQMNNEAQL ETSGNESEEV ASEVLEGSKS  300
SSRAPNFNDV SCFEEFHVIV NGISIDSEIP EHIRRKYYDL CSTKNVFLHD CLLPGLYVKL  360
AGGIIVETVN IADAIRGCKL TTSKEEFEVW EKSLRSFELL GLNVGFLRVH LSRLFDIAFD  420
SEGALETRRY WAARMDRSRA EDEIENLEAK ISELKEFSAK CDRDIENLKT RAERYEVMFR  480
EEVSASW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16584KRKPKEMIDEAPSVFRRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00763.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835160.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like
TrEMBLA0A022RH640.0A0A022RH64_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72042328
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-35B3 family protein