PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00431.1.p
Common NameLOC105960643, MIMGU_mgv1a019124mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 171aa    MW: 19755.6 Da    PI: 10.7173
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00431.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.22.2e-141461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W +eEd +l ++v+ +G g+W+t +++ g  R +k+c++rw +yl
  Migut.K00431.1.p 14 KGFWKPEEDFILRKYVETHGEGNWTTLSKKSGSMRGGKSCRLRWKNYL 61
                      688*****************************9999**********97 PP
2Myb_DNA-binding50.45.1e-1670112448
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       ++++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l
  Migut.K00431.1.p  70 MSEDEKDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 112
                       79*****************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.797961IPR017930Myb domain
SuperFamilySSF466891.43E-2811108IPR009057Homeodomain-like
SMARTSM007178.6E-121363IPR001005SANT/Myb domain
PfamPF002491.5E-121561IPR001005SANT/Myb domain
CDDcd001675.71E-91761No hitNo description
Gene3DG3DSA:1.10.10.601.8E-201768IPR009057Homeodomain-like
PROSITE profilePS5129423.5962116IPR017930Myb domain
SMARTSM007176.2E-1466114IPR001005SANT/Myb domain
PfamPF002491.6E-1468112IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-2269114IPR009057Homeodomain-like
CDDcd001671.75E-1070112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010026Biological Processtrichome differentiation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MEGTSKESKP RFKKGFWKPE EDFILRKYVE THGEGNWTTL SKKSGSMRGG KSCRLRWKNY  60
LRPNIKHGMM SEDEKDLIIR LHKLLGNRWS LIAGRLPGRT DNEVKNYWNT HLNKTKLCPT  120
ITTTSKKRQL SLSTTSRHQE HVGEKKETTA DNSNVVDSWV DHKTTTKIKT *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-23101143106B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activation factor positively regulating trichomes development (PubMed:24803498). Has a function nearly equivalent to that of GL1 and can complement gl1 mutants (PubMed:24803498). {ECO:0000269|PubMed:24803498}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00431.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By auxin (IAA). {ECO:0000269|PubMed:9839469}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840284.11e-122PREDICTED: transcription factor MYB82-like
SwissprotQ9LTF74e-60MYB82_ARATH; Transcription factor MYB82
TrEMBLA0A022R4471e-121A0A022R447_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52600.14e-55myb domain protein 82