PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J01293.1.p | ||||||||
Common Name | LOC105971495, MIMGU_mgv1a019824mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 164aa MW: 18456.1 Da PI: 8.2943 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 58.5 | 1.3e-18 | 90 | 149 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYG+ + +r YYrC + gC++ k+v s+ +p++++itY+g+H++ Migut.J01293.1.p 90 DDGFSWRKYGREYIFAPLLTRTYYRCIDHvreGCMAMKEVRMSSYEPNAIDITYRGKHTC 149 8*************************987788**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.3E-18 | 76 | 149 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.19 | 84 | 147 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-17 | 86 | 149 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.0E-12 | 89 | 151 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.3E-16 | 90 | 149 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MASVSSSSEE YKKLVNEITK GKEKVKHLKE SSSKIGDSVL ESKLVSYEEA LSLLKLFAPQ 60 GQCQYNVVSS SSDESARVTV RPKVPSEEFD DGFSWRKYGR EYIFAPLLTR TYYRCIDHVR 120 EGCMAMKEVR MSSYEPNAID ITYRGKHTCL RSAPVPLEQV LGI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J01293.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012851802.1 | 1e-118 | PREDICTED: probable WRKY transcription factor 46 | ||||
TrEMBL | A0A022QBF9 | 1e-116 | A0A022QBF9_ERYGU; Uncharacterized protein | ||||
STRING | Migut.J01293.1.p | 1e-117 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1843 | 24 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24110.1 | 4e-18 | WRKY DNA-binding protein 30 |
Link Out ? help Back to Top | |
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Phytozome | Migut.J01293.1.p |
Entrez Gene | 105971495 |