PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01193.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 491aa    MW: 57758.7 Da    PI: 7.2902
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01193.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.62.3e-181097196
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      ffk ++p +++k+  l +p  f+ +++g+ +e   ++l d+ ++sW+vk+   +++++++l++GW++Fv++n ++ gD++ F++ g+  fe +  
  Migut.J01193.1.p 10 FFKFFLPRSSSKH--LEIPSAFTLSMQGDWPE--NIVLHDRYNNSWQVKV--GQHRDKFYLRDGWEKFVEDNSIEGGDVIFFEYFGNGVFETK-- 96
                      8888866666665..9**********988655..6***************..********************************999888544.. PP

                      E CS
                B3 96 v 96
                      +
  Migut.J01193.1.p 97 I 97
                      4 PP
2B351.41.9e-16193275997
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       ++ ++++l+lp  f+ + +g    +  + ++d+  ++W+vk+  +k +++ ++++GW +Fv++ng+++g +v F+++g+  f  + k++
  Migut.J01193.1.p 193 SSKRKRQLRLPSAFTLSVQGA--LPERVFFQDRYENTWQVKV--EKVRSKLYFGDGWTDFVEDNGIRVGHIVFFEYSGNGLF--KTKIH 275
                       5667788********999776..6668***************..9***9***************************998777..55554 PP
3B3512.6e-16394477792
                       .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       + ++ ++g l++pk+ ++++ ++   + ++++ d++gr+W+ k +++k ++ry+ t+GW++ ++ n +++ D ++ +++++ ++  +
  Migut.J01193.1.p 394 KINTKRKGELYIPKEVVRDNILD--LPEEIVMIDPHGRTWTAKGKIWKDGRRYY-TRGWRRLCQRNFVEDEDLCICEFIETgQSLIM 477
                       456778899***********666..5568***********************97.77*******************99986455544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.8E-213103IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.55E-214103IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086314.1568101IPR003340B3 DNA binding domain
CDDcd100174.05E-15999No hitNo description
PfamPF023624.5E-161097IPR003340B3 DNA binding domain
SMARTSM010192.3E-1410101IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.1E-19184280IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.592185278IPR003340B3 DNA binding domain
SuperFamilySSF1019363.34E-18185280IPR015300DNA-binding pseudobarrel domain
CDDcd100174.24E-13186276No hitNo description
SMARTSM010191.5E-10188278IPR003340B3 DNA binding domain
PfamPF023625.3E-14192275IPR003340B3 DNA binding domain
SuperFamilySSF1019364.51E-18388474IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.73388485IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.4E-17388476IPR015300DNA-binding pseudobarrel domain
CDDcd100176.41E-13389479No hitNo description
SMARTSM010193.1E-13391483IPR003340B3 DNA binding domain
PfamPF023623.5E-13393473IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MEDSSNGLSF FKFFLPRSSS KHLEIPSAFT LSMQGDWPEN IVLHDRYNNS WQVKVGQHRD  60
KFYLRDGWEK FVEDNSIEGG DVIFFEYFGN GVFETKIHDS TACEKKRLGA RKSSFKQQKK  120
VPNDTYALEW ENTRDEVAEE IPTNDYAPHR KDDYSSDERE KATRTRRVSD LYRGEAFQSG  180
FVQPKPHFAR KISSKRKRQL RLPSAFTLSV QGALPERVFF QDRYENTWQV KVEKVRSKLY  240
FGDGWTDFVE DNGIRVGHIV FFEYSGNGLF KTKIHDSTAC KKKRFGACKA EKHRKKAVNE  300
EREAPKYIEE NREIKMENEG NDVDDNYEFN YDNMADDVEE EIPTNDRAPE MEQETTTGEK  360
KKRTRTRRVT DIYGREIFKA GLMAVPVNPY FVTKINTKRK GELYIPKEVV RDNILDLPEE  420
IVMIDPHGRT WTAKGKIWKD GRRYYTRGWR RLCQRNFVED EDLCICEFIE TGQSLIMDVS  480
FVREEAYNYY *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01193.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834169.10.0PREDICTED: B3 domain-containing protein At5g57720-like
TrEMBLA0A022RME01e-175A0A022RME0_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10912264
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-17B3 family protein