PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00120.1.p
Common NameMIMGU_mgv1a026338mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 414aa    MW: 47433.1 Da    PI: 6.2681
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00120.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS113.72.4e-358441258374
              GRAS  58 selykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgs 149
                       ++  k+ + +  +e++ ++   a+k+f++++P+ kf+h++aN+aI+e++ ++ e +H iDfdi++G+QW+++++a+  R     ++R+T ++ 
  Migut.J00120.1.p  84 QHHNKKSNYNYLKEESFKNFYPAFKAFYQIFPYGKFAHFVANSAIMESLPSDaEIIHLIDFDIGEGVQWASFIEAIKHRCT---EVRVTSIKF 173
                       444444444555555677888899*************************9986788**********************965...5*******9 PP

              GRAS 150 pesg..skeeleetgerLakfAeelgvpfefnvlvakrledl..eleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvk. 232
                        e++  s  + e t++rL++ A + g++   + +  ++le +  ++e+ +  ++   + n++++l ++ + + + +        +++L++v  
  Migut.J00120.1.p 174 DEKDesSPFRFEDTKRRLHDHAWSYGLNAIVEEVRFQDLEIFtnNIEKGDYGRKSLYVFNCHVALPHMGRVRSKKHVfkflrVAENFLHQVTc 266
                       998888999******************99888875555555533444445555889999********98544443334455467788888853 PP

              GRAS 233 ...slsPkvvvvveqeadh.nse...sFlerflealeyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWre 317
                          ++s  +++  + ++ +  ++   s+ + +   + +y al++s+e  +p++  e+r+ +E  ++g++++++v  ++ e +       +  e
  Migut.J00120.1.p 267 wgsTTSKGIITYGNGDVFYdKTTtlmSYSTFLDANIAHYQALLESMEFDFPKHLgEARRALECLFVGPSVSSIVRDRKWEEIR------QCGE 353
                       332455668999999988844443334444555669***************999899******************99999444......4444 PP

              GRAS 318 rleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                            G+  ++lse  +++ak ++++     g r+e  +++++v+ W++ ++v v++W+
  Migut.J00120.1.p 354 IEFGLGLDGLELSEASVDEAKEVVKEGVsLYGVRIEsGKKNEMVIEWNGISIVRVCCWK 412
                       445689*****************9987769999999557999****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098517.83211390IPR005202Transcription factor GRAS
PfamPF035148.1E-3384412IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MFIDHDAHGM VSETCMNMHT SLILPFQGME VDNHLSLLNL IVAYAEVMDR NQEITGLSEV  60
IGRSIIKKVN PFGGPTERVL YMFQHHNKKS NYNYLKEESF KNFYPAFKAF YQIFPYGKFA  120
HFVANSAIME SLPSDAEIIH LIDFDIGEGV QWASFIEAIK HRCTEVRVTS IKFDEKDESS  180
PFRFEDTKRR LHDHAWSYGL NAIVEEVRFQ DLEIFTNNIE KGDYGRKSLY VFNCHVALPH  240
MGRVRSKKHV FKFLRVAENF LHQVTCWGST TSKGIITYGN GDVFYDKTTT LMSYSTFLDA  300
NIAHYQALLE SMEFDFPKHL GEARRALECL FVGPSVSSIV RDRKWEEIRQ CGEIEFGLGL  360
DGLELSEASV DEAKEVVKEG VSLYGVRIES GKKNEMVIEW NGISIVRVCC WKS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00120.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831779.10.0PREDICTED: nodulation-signaling pathway 2 protein-like
TrEMBLA0A022RPN50.0A0A022RPN5_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.J00120.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53611938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.13e-17GRAS family protein