PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00119.1.p
Common NameLOC105952746, MIMGU_mgv1a022683mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 494aa    MW: 56066.2 Da    PI: 4.406
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00119.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS147.51.3e-451354922373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL +  eav++g+++l + +++ +++ +sp+g++++R+a  + +  ++r           l+  e+   + ++   a++++++  P  +f+
  Migut.J00119.1.p 135 LHLLRAYGEAVENGEKKLSEVIVKSINNKSSPQGNTVERVAYNLFQSGESRGEF--------LR--EE---SIKNIEVAFNVLYQSLPNGRFA 214
                       68999999*********************************9877766666544........22..22...35566678899*********** PP

              GRAS  95 hltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlv 182
                       h++aN+aIle++ ++  ++ i+Dfd+++G+QWp+L++aL++  ++   ++iT v+ +e++    s  + e t++rL   A+++gv ++++   
  Migut.J00119.1.p 215 HFAANSAILESIPKDaVAIQIVDFDMGEGIQWPPLIEALSK--GKVKLMKITSVKLEEESestsSCWSFEGTKKRLLAHARQFGVALQIEE-- 303
                       ************9986899*********************9..77789******998877777677789********************98.. PP

              GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPk...vvvvveqe.adhnsesFlerflealeyysalfdsl 271
                        +r+ed+  e + vk+gE ++ n+ + l +++++  s +s  +e+Lk+ k++ ++   ++ + + e +  + ++F+  f++ +++y a+f+sl
  Migut.J00119.1.p 304 -RRIEDFASE-MMVKSGEWVVYNCTVGLPHMVRR-RSRRS-VNEFLKVAKEMLANyggILNIGDGEeVGESLNNFASYFANFVRHYQAVFESL 392
                       .8*****555.55******************944.44444.69*********987555777777553777889******************** PP

              GRAS 272 eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlg 361
                       e + p    e+r+ +Er +l++  + +   +  e   ++++ +  re  e++ ++  ++s+++ ++ak ++++ + s   r+e  +++++vl 
  Migut.J00119.1.p 393 EGNCPVYLaEARTAMERLFLAPFMCPLAWFQDWE---EMRKSGVFRE--ESSWLEGRKISQENLAEAKVMVNEREsSYSVRIEkLRENEMVLQ 480
                       ****987669***************999999888...6666666666..45668899******************4444555533599***** PP

              GRAS 362 WkdrpLvsvSaW 373
                       Wk+ pLv vS W
  Migut.J00119.1.p 481 WKGTPLVRVSTW 492
                       ************ PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098519.712108471IPR005202Transcription factor GRAS
PfamPF035144.6E-43135492IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MMQPELLLPS WPIFDFCEID GFDFSSSFAS PEEYSSEISS KSNLRNTFQD EFFDLENLGD  60
EIHICSAMEE ICEWINGDET EGNSSSPITI EEDEWSPSLC QESSRDSTLL PIHITDMSLV  120
FPGDDVTVDD HLSLLHLLRA YGEAVENGEK KLSEVIVKSI NNKSSPQGNT VERVAYNLFQ  180
SGESRGEFLR EESIKNIEVA FNVLYQSLPN GRFAHFAANS AILESIPKDA VAIQIVDFDM  240
GEGIQWPPLI EALSKGKVKL MKITSVKLEE ESESTSSCWS FEGTKKRLLA HARQFGVALQ  300
IEERRIEDFA SEMMVKSGEW VVYNCTVGLP HMVRRRSRRS VNEFLKVAKE MLANYGGILN  360
IGDGEEVGES LNNFASYFAN FVRHYQAVFE SLEGNCPVYL AEARTAMERL FLAPFMCPLA  420
WFQDWEEMRK SGVFREESSW LEGRKISQEN LAEAKVMVNE RESSYSVRIE KLRENEMVLQ  480
WKGTPLVRVS TWI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A8e-1714949218374GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00119.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831780.10.0PREDICTED: nodulation-signaling pathway 2 protein-like
TrEMBLA0A022RNA20.0A0A022RNA2_ERYGU; Uncharacterized protein
STRINGMigut.J00119.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53611938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.17e-26GRAS family protein