PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00751.1.p
Common NameLOC105975959, MIMGU_mgv1a026038mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family FAR1
Protein Properties Length: 669aa    MW: 77322.5 Da    PI: 5.2504
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00751.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.16.1e-2361140287
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                       fYn YAk+ GF vr+s++ ++ +++e ++++f Cs  g++++++ +     r+r+etrtgC a++k +++++++w+++++eleHnH
  Migut.I00751.1.p  61 FYNCYAKQQGFGVRVSNTWYR-KSKERYRAKFSCSSAGFKKKTEAN-----RPRPETRTGCPAMIKFRLMDNHRWRIIEMELEHNH 140
                       9***************99997.66779**************98877.....*********************************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.1E-2061140IPR004330FAR1 DNA binding domain
PfamPF105512.3E-20259351IPR018289MULE transposase domain
PROSITE profilePS509669.285539575IPR007527Zinc finger, SWIM-type
SMARTSM005758.2E-5550577IPR006564Zinc finger, PMZ-type
PfamPF044343.7E-4550573IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    Send to blast
MDEFSLNTEP ACDDEAEEFE IDGECAMTEY VGQTGNILRG ENPLPPAVGM EFDSYDDVYY  60
FYNCYAKQQG FGVRVSNTWY RKSKERYRAK FSCSSAGFKK KTEANRPRPE TRTGCPAMIK  120
FRLMDNHRWR IIEMELEHNH LTGPAGGSFC KSRRITDLGS KRPLSIDGSE EVCKIKLFRT  180
LVIDEEDDGG ETRINIDGGD DKLKLKQGDA REMLDFFTRM QLTSPGFFYV MDFNEKGCLR  240
NVFWAETRCR AAYGYFGDVV FFDTKSLTEN YEVPLVVFAC INHHMQMVPL GCGLVSSQSV  300
ESFIWLFRAW ITYMVGRAPQ TIITGPCKAL QSAVSDVFPR AFHCLSLTNI KEKIASEFDP  360
AFTRVVYGSL RVDEFELAWE DMVKTHGLEN HKWLQTLYED RKRWVPLYLK EVFLAGLFPV  420
KENERLSSPF EEYLSPQTSL KEFLCTYERA LLEIEQRETL SDMESTNNSS CALKSRFSFE  480
LQLSKLYTNE IFKKFQDEIE GMYSCFSVRE ISTDSSSLTY YIVKEDILVE QNHRLTREFE  540
VMYNTCDSEI LCACGLFNFR GYLCRHALSV INETGLEETP PRYILARWRK DIGRDYIFNH  600
GCNNNNNNGD DIDINNPVHR YDSLYKCVVK VVDEGRRSHD RYKFASRSLD EILNKVHVQE  660
NCPATSSM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00751.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856675.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A022Q3680.0A0A022Q368_ERYGU; Uncharacterized protein
STRINGMigut.I00751.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13471970
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.10.0FAR1-related sequence 6