PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.I00466.2.p

Common Name

MIMGU_mgv1a013663mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 214aa MW: 24837.7 Da PI: 9.5464

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.I00466.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	3.9e-05	36	59	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C++C+k+F+ +L +H + H Migut.I00466.2.p 36 YRCGYCKKVFRAEKYLDQHFDNrH 59 9******************77666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	8.974	36	59	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	38	59	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0016021	Cellular Component	integral component of membrane
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence Send to blast
MEKEKYQLSS RCRLHQSNDI FREQEEHKIH VDINEYRCGY CKKVFRAEKY LDQHFDNRHY 60 NLLNVSHGKC LADLCGALHC DFVVNTHSQK TKCNPGGCAR NRHLCEIFIY GSVSLRDLAN 120 SCFPLNEGPS VTRLHEFFLR QFCDAHTCSK GRKPFSRGGK KHTSVFYLAV SILILMFLPI 180 FYLIVYLYQR EMGKSTTQLK RISRPPGRKP KPS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.I00466.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012854614.1	1e-148	PREDICTED: uncharacterized protein LOC105974100
TrEMBL	A0A022Q9H4	1e-157	A0A022Q9H4_ERYGU; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63280.1	4e-86	C2H2-like zinc finger protein

Link Out ? help Back to Top
Phytozome	Migut.I00466.2.p