PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00466.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 285aa    MW: 32902.9 Da    PI: 9.5231
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00466.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.7e-05107130123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       y+C++C+k+F+   +L +H  + H
  Migut.I00466.1.p 107 YRCGYCKKVFRAEKYLDQHFDNrH 130
                       9******************77666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.974107130IPR007087Zinc finger, C2H2
PROSITE patternPS000280109130IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MANRRIGKTI PCSAFSVFIL LLSSATSQSQ PNQGIDIDPS RNIKEQHPEV HCSRERSRAA  60
WKIIEEYLIP FMEKEKYQLS SRCRLHQSND IFREQEEHKI HVDINEYRCG YCKKVFRAEK  120
YLDQHFDNRH YNLLNVSHGK CLADLCGALH CDFVVNTHSQ KTKCNPGGCA RNRHLCEIFI  180
YGSVSLRDLA NSCFPLNEGP SVTRLHEFFL RQFCDAHTCS KGRKPFSRGG KKHTSVFYLA  240
VSILILMFLP IFYLIVYLYQ REMGKSTTQL KRISRPPGRK PKPS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00466.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854614.10.0PREDICTED: uncharacterized protein LOC105974100
TrEMBLA0A022Q9H41e-157A0A022Q9H4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80841216
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.11e-103C2H2-like zinc finger protein