PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00388.1.p
Common NameMIMGU_mgv1a025928mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 366aa    MW: 39903.4 Da    PI: 9.0212
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00388.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-12170214347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
  Migut.I00388.1.p 170 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 214
                       7*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007177.72076IPR001005SANT/Myb domain
SuperFamilySSF466891.12E-52380IPR009057Homeodomain-like
PROSITE profilePS500905.5752474IPR017877Myb-like domain
PROSITE profilePS5129417.282162219IPR017930Myb domain
SuperFamilySSF466891.12E-16165220IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-17167217IPR006447Myb domain, plants
SMARTSM007172.3E-10167217IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.6E-11168213IPR009057Homeodomain-like
PfamPF002499.8E-11170214IPR001005SANT/Myb domain
CDDcd001677.69E-9170215No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:0009733Biological Processresponse to auxin
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0046686Biological Processresponse to cadmium ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MSGTSTGTGW SVGEGVGVGV GVGWSREEEK AFENAIAMHW SSDEEWREQT WIKIGCLVPS  60
KSIHELKHHY QLLVEDVAAI EAGNVPLPNY NNNNMMQQPP SSLSTTSYKD HNFHDKDNSS  120
NNNNINKPFT ANSNFSSGAA GSHESSKGGG GGRGGGGCSR SDQERRKGIP WTEEEHRLFL  180
LGLDKFGKGD WRSISRNFVI SRTPTQVASH AQKYFIRLNS INRDRRRSSI HDITTINGDV  240
VPSPSTHHHH HLPPPPITGQ QYLHHHPPPN SAAPPPPLLK QQHHQRVNMH HHHHALGMYG  300
GGGGAPPPMG HPVNVPPGRH IASAVGTPVM ISPGNSHHYQ HHHPPPYVPP PLAAQMPPPP  360
PPPMN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150156GGRGGGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00388.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827681.10.0PREDICTED: transcription factor DIVARICATA
TrEMBLA0A022PTB20.0A0A022PTB2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58012136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.12e-22MYB family protein