PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00107.1.p
Common NameLOC105959724, MIMGU_mgv1a008388mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 376aa    MW: 42468.4 Da    PI: 5.265
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00107.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-1076117346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++Tt+E+el ++++   G++ W  Ia+ ++ gRt++++k  w++
  Migut.I00107.1.p  76 SFTTQEEELVIQLHSAIGSR-WPIIAQQLP-GRTDNDVKTLWNS 117
                       79******************.*********.********99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500905.2971064IPR017877Myb-like domain
SuperFamilySSF466899.21E-1451127IPR009057Homeodomain-like
PROSITE profilePS5129414.23469123IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-1572123IPR009057Homeodomain-like
SMARTSM007173.2E-873121IPR001005SANT/Myb domain
PfamPF002494.4E-975117IPR001005SANT/Myb domain
CDDcd001671.57E-576119No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MVKTPPCSDK LQMQKGIWND DGDRERNAAY VPKQDGTGNW TTFSKRSGSG QKRSGKNSRE  60
KWHNGNNSKC DPKHKSFTTQ EEELVIQLHS AIGSRWPIIA QQLPGRTDND VKTLWNSKLR  120
KKLSAMGIDP VTHKPFSQIL ADYGNIGAFP KARTRFSSLS KDIKNSIVFK SSNSELISQN  180
PNNNNNNNNI NPHENFSHYF HDHLFSPSPS NISDIAHYNN NNNPLDLYSQ LQSVNFVTKK  240
PDNNNNNLNL AQQQQQQLFV NNECATSSSV NQEFSWSDFF LEDAQLENEG NILVAHECGG  300
GGEKLESEED QVKERYIINE DNNNEINALV DNNNNNTFEA LSSPSNSASS FVEAMIESQD  360
EMFSQLPCFY EEQFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A3e-16151237108B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00107.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839313.10.0PREDICTED: myb-related protein 308-like isoform X1
TrEMBLA0A022R8580.0A0A022R858_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA123481922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.19e-34MYB family protein