PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H01641.2.p | ||||||||
Common Name | LOC105962171, MIMGU_mgv1a010983mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | G2-like | ||||||||
Protein Properties | Length: 296aa MW: 32315 Da PI: 5.2496 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.3 | 8.3e-34 | 13 | 67 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Migut.H01641.2.p 13 RQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 67 58****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.261 | 10 | 70 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.42E-17 | 12 | 67 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.2E-32 | 12 | 68 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.9E-25 | 14 | 68 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.1E-9 | 15 | 66 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 9.1E-23 | 100 | 145 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MDSGGNNSNL ASRQRLRWTH ELHERFVDAV AQLGGPDRAT PKGVLRVMGV QGLTIYHVKS 60 HLQKYRLAKY LPDSSSDGTK AEKKESGDIL SSLDGSSSLQ ITDALKLQME VQKRLHEQLE 120 VQRQLQLRIE AQGKYLKKII EEQQRLAGGL SEAPGSGVPA PATDEICPES DNKTDPATPA 180 ATSEPPFLEI PIKERASIDE SFSSHHEPLT PDSDCQVGPP LEIENERPTK RPRGSGDVAF 240 TKSEIVQTHS ILESSLSPPY QQQNSIFLTG EQFDGSSVLS IGSENQLERI SGSNL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-23 | 13 | 70 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-23 | 13 | 70 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-23 | 13 | 70 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-23 | 13 | 70 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-23 | 13 | 70 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H01641.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012841911.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like | ||||
Refseq | XP_012841912.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like | ||||
Refseq | XP_012841913.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like | ||||
Refseq | XP_012841914.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like | ||||
Refseq | XP_012841915.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like | ||||
Refseq | XP_012841917.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like | ||||
Refseq | XP_012841918.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like | ||||
Swissprot | Q9SJW0 | 1e-120 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A022R1G2 | 0.0 | A0A022R1G2_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-96 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.H01641.2.p |
Entrez Gene | 105962171 |