PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01031.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 452aa    MW: 51302.6 Da    PI: 9.0686
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01031.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3512.6e-1697184194
                       EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                       f+k +++s+v++  +l lp+kf++++   k  ++ +++l d + + ++ k+    ++ +  l++GW+ F  +++L egD+vvF+l++  +f+l
  Migut.H01031.1.p  97 FVKLMLRSHVTQGFWLGLPNKFCRDYlP-K--NDEKIVLVDANEKGYDTKY--LAGRTG--LSGGWRAFSIEHNLLEGDVVVFHLIEPCKFKL 182
                       89************************42.2..3458***************..555544..*************************9888865 PP

                       EE CS
                B3  93 vv 94 
                       ++
  Migut.H01031.1.p 183 YI 184
                       54 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.1E-1991187IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.85E-2292187IPR015300DNA-binding pseudobarrel domain
CDDcd100171.21E-2495186No hitNo description
SMARTSM010192.7E-2197188IPR003340B3 DNA binding domain
PROSITE profilePS5086312.90197188IPR003340B3 DNA binding domain
PfamPF023621.2E-1497184IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MAIISSKNGS KENPVSASSS SSKSKLKQKK STSEFKRKMA EERLMDLTNT LKNIGDSVCM  60
DIIRYQPKEN LTSDLSSSAM ERAEEVQRNL PKKFPSFVKL MLRSHVTQGF WLGLPNKFCR  120
DYLPKNDEKI VLVDANEKGY DTKYLAGRTG LSGGWRAFSI EHNLLEGDVV VFHLIEPCKF  180
KLYIVRARRL TEVDGAMSLV NLDSHPEPIK ALKMEEPEEN ANIIETKTRN KYPNPLVQDN  240
NNNQKKKKKT KKNIPTTSDD AEIADGIKFS ESRLDFKYVN CFQDFSIHLD GGLVIDSEVP  300
RHQKKKYYDL CRSQNTFLHE NLVRGLNTKL AAGIISETVN IADAIRASTT PHEHLESWDK  360
TLKAFEDLGM SVGPLRARIR EMMSLYRDSR ARIELMRKER AEAEGVMKEL SQRLSNVKTC  420
VDKYDAIIDD LINARNEGLG SKFEEIACAP W*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01031.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850922.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like
TrEMBLA0A022QFU50.0A0A022QFU5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30232343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-37B3 family protein