PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00392.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 343aa    MW: 37293.8 Da    PI: 6.8633
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00392.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-173779347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      ++T+eEd+ +v+a++++G++ W+tIar +  gRt++ +k++w++ 
  Migut.H00392.1.p 37 AFTPEEDDTIVRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 79
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.29E-152986IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-212983IPR009057Homeodomain-like
PROSITE profilePS5129424.0213084IPR017930Myb domain
SMARTSM007171.4E-143482IPR001005SANT/Myb domain
PfamPF002491.0E-143779IPR001005SANT/Myb domain
CDDcd001678.15E-123780No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MWKEGRYQEN VEAGHREACK GLSMGSVQLS PQVEHRAFTP EEDDTIVRAH AKFGNKWATI  60
ARLLSGRTDN AIKNHWNSTL KRKCSSLSSD EGGNFDNNDG GGQPERPLKR SVSDGSGIPV  120
SGMFFNPGSP SGSDASDSSL PSHIYKPVAR SGVVLLETAS SVVDPTTSLS LSLPGVDPTE  180
STNHRTESTQ PLAVNPIIHM PPPILSIPPP PPPPPPSPPT HVISLSQLRT HIASGLGSPA  240
TLAPPAPSPM PAAAVQQQPD NVFVPFGAEL MAVMQEMIKS EVRNYMMGLE TQQQRYQIQQ  300
QQEQQQYINI QHQQQQQQQQ YNNAYEGFRN AAMKRIGISR ID*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A8e-18288349104MYB PROTO-ONCOGENE PROTEIN
1mse_C7e-18288349104C-Myb DNA-Binding Domain
1msf_C7e-18288349104C-Myb DNA-Binding Domain
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00392.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855507.10.0PREDICTED: transcription factor MYB44
TrEMBLA0A022RZR51e-154A0A022RZR5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15862471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.15e-41myb domain protein 73