PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00315.1.p
Common NameLOC105973744, MIMGU_mgv1a011545mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 279aa    MW: 30738.4 Da    PI: 8.5732
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00315.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.13.1e-18130184256
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       rk+ ++tk q   Le+ F+++++++ +++++LA+ l+L  rqV vWFqNrRa+ k
  Migut.H00315.1.p 130 RKKLRLTKAQSALLEQSFKQHSTLNPKQKQDLARDLKLRPRQVEVWFQNRRARTK 184
                       678899***********************************************98 PP
2HD-ZIP_I/II122.42.1e-39130220192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       +kk+rl+k q++lLE+sF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eL+ +lk
  Migut.H00315.1.p 130 RKKLRLTKAQSALLEQSFKQHSTLNPKQKQDLARDLKLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLQKELQELK-ALK 220
                       69*************************************************************************************9.665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.584126186IPR001356Homeobox domain
SuperFamilySSF466893.25E-17127187IPR009057Homeodomain-like
SMARTSM003899.2E-15128190IPR001356Homeobox domain
PfamPF000461.0E-15130184IPR001356Homeobox domain
CDDcd000863.06E-15130187No hitNo description
Gene3DG3DSA:1.10.10.607.2E-17130184IPR009057Homeodomain-like
PROSITE patternPS000270161184IPR017970Homeobox, conserved site
PfamPF021832.0E-10186220IPR003106Leucine zipper, homeobox-associated
SMARTSM003404.0E-24186229IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MGMEDLCSTG LFLGLGFSSQ SNGNKKPINN NNNNNIGSDH HEPSLKLSLS GETFDQNHAV  60
KKVVKSDGEK GGGFNDLYRQ DSGGSSFSGH VSSSVKRERE NCSGGEEGGE LDRVNSSRVS  120
DEDDDVINGR KKLRLTKAQS ALLEQSFKQH STLNPKQKQD LARDLKLRPR QVEVWFQNRR  180
ARTKLKQTEV DCEFLKKCCE TLTEENRRLQ KELQELKALK SAQPLYMQLP AATLTMCPSC  240
ERIGAAAAPT ENSAKSSFVL APKPPHFYNP FTNSSAAC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178186RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00477DAPTransfer from AT4G37790Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00315.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854241.10.0PREDICTED: homeobox-leucine zipper protein HAT22-like
SwissprotP466042e-94HAT22_ARATH; Homeobox-leucine zipper protein HAT22
TrEMBLA0A022RX480.0A0A022RX48_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-83HD-ZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Liu T,Longhurst AD,Talavera-Rauh F,Hokin SA,Barton MK
    The Arabidopsis transcription factor ABIG1 relays ABA signaled growth inhibition and drought induced senescence.
    Elife, 2017.
    [PMID:27697148]
  3. Song L, et al.
    A transcription factor hierarchy defines an environmental stress response network.
    Science, 2017.
    [PMID:27811239]