PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00175.1.p
Common NameLOC105970650, MIMGU_mgv1a009071mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family E2F/DP
Protein Properties Length: 355aa    MW: 40459.7 Da    PI: 8.3596
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00175.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP72.64.4e-23772171
           E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                      rkeksL+ l+++f kl++++  +++ l+ +a +L    v  +rRRiYDi+N+Le++++++kk+kn+++wkg
  Migut.H00175.1.p  7 RKEKSLGRLCTNFFKLYNREGVDTIGLDAAALQL---GV--ERRRIYDIVNILEGIGVLQKKAKNQYTWKG 72
                      79*****************999************...**..****************************98 PP
2E2F_TDP69.15.2e-22129206270
           E2F_TDP   2 keksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwk 70 
                       ++ksL+lltq+f+kl+ +s+ + ++l+e+a +L+ +       ++k RR+YDi+NV+++++liek      k+++rw+
  Migut.H00175.1.p 129 RQKSLGLLTQNFVKLFLCSDMELISLDEAALALLWDghdekALRTKSRRLYDIANVFSSMKLIEKvcseIGKSAYRWI 206
                       79*********************************9**9998999********************999999******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.104.1E-25473IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467856.8E-15770IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013723.4E-26772IPR003316E2F/DP family, winged-helix DNA-binding domain
PfamPF023191.5E-20872IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene3DG3DSA:1.10.10.101.4E-19124207IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013722.6E-24128207IPR003316E2F/DP family, winged-helix DNA-binding domain
PfamPF023199.2E-18130206IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467858.84E-11130206IPR011991Winged helix-turn-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005667Cellular Componenttranscription factor complex
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MASPYCRKEK SLGRLCTNFF KLYNREGVDT IGLDAAALQL GVERRRIYDI VNILEGIGVL  60
QKKAKNQYTW KGFGAIPEAL KVLKEQGLKE EFGTYVANVS NQKKYALPSD SKTEWQDKCS  120
ESDKSEHKRQ KSLGLLTQNF VKLFLCSDME LISLDEAALA LLWDGHDEKA LRTKSRRLYD  180
IANVFSSMKL IEKVCSEIGK SAYRWIDMES CGDGLSIAPD AKNTKRRAFG TEITNTLVKR  240
CNTSSTDWKL IEKVNMGIHS KDNSKAVQEE VLTEQHQNYG TKDFVFGPFT PNVTKSEARE  300
NKNGGQNQDW QNLFRDYRPQ YCNQAVNDLF HHYSEAWNSW YVEAKDKQQI EPGS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4yo2_A3e-3071944222Transcription factor E2F8
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00175.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850942.10.0PREDICTED: E2F transcription factor-like E2FF isoform X1
TrEMBLA0A022RXH20.0A0A022RXH2_ERYGU; Uncharacterized protein
STRINGMigut.H00175.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25222457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01330.14e-97DP-E2F-like protein 3