PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.G00433.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 257aa MW: 29665.3 Da PI: 9.9421 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28 | 4e-09 | 95 | 141 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h++ Er RR+++N+ + + + lP a +K +K +iLe+Av+ I ++ Migut.G00433.1.p 95 HKHKISERMRREKLNQNYLAIHKFLPLA-----TKSDKKSILEMAVKEIEEM 141 68**************************.....9*************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.7E-10 | 87 | 147 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.22E-6 | 91 | 143 | No hit | No description |
PROSITE profile | PS50888 | 12.252 | 92 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.8E-6 | 95 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.1E-7 | 95 | 143 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0094 | 98 | 147 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MTVATITVRE VRTNRKTEAM EEFFQLCPSR TSISWFGDAP MVDIQSAFHA YTEKPFRGLS 60 HNHRNINKRM MEFLKKTYLP PAGEIERYRV KDRSHKHKIS ERMRREKLNQ NYLAIHKFLP 120 LATKSDKKSI LEMAVKEIEE MKRWIEMGKI LRATEKFREE VEKAEIKLRV AYPASGVDSM 180 LEVLKCLKET GSNATSIVSN FSDHEFSAAL VVETKIRAAD VEKAVQRTLF EAEMKFRQQV 240 KDNSGNCLTI FESGPL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.G00433.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012842715.1 | 1e-172 | PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH92 | ||||
TrEMBL | A0A022R087 | 1e-101 | A0A022R087_ERYGU; Uncharacterized protein | ||||
STRING | Migut.G00433.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12463 | 18 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 1e-36 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.G00433.1.p |