PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.F00242.1.p | ||||||||
Common Name | LOC105971727, MIMGU_mgv1a019981mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 222aa MW: 24806.2 Da PI: 6.6693 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89.3 | 3.1e-28 | 128 | 189 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK++ g+++pr+YYrCt++ gC+++k+v+ s+edp+++eitY+ +H+++ Migut.F00242.1.p 128 LDDGYGWRKYGQKDILGAKYPRGYYRCTHRngqGCMATKQVQSSNEDPTIFEITYRRKHTCN 189 59***************************99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.0E-28 | 118 | 189 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.435 | 123 | 186 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.88E-25 | 126 | 190 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.7E-38 | 128 | 190 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-26 | 129 | 188 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MENFGSDDLV KELSQGRELA NQLLIHFNYD RSSSSNETRD FLIQQILSSY DNALSALRHS 60 RYGGGAAPPP PPATSDSPLS LAGSPHRSDD SDDQDFNDQP SKKKKASSAI TWMQKVKVCT 120 ETGNEGQLDD GYGWRKYGQK DILGAKYPRG YYRCTHRNGQ GCMATKQVQS SNEDPTIFEI 180 TYRRKHTCNP RAYPTNTPSV PATMPDPQNE DPNPFTQNPQ QI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 3e-18 | 128 | 191 | 14 | 78 | Disease resistance protein RRS1 |
5w3x_D | 3e-18 | 128 | 191 | 14 | 78 | Disease resistance protein RRS1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.F00242.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012852050.1 | 1e-165 | PREDICTED: probable WRKY transcription factor 30 | ||||
TrEMBL | A0A022Q916 | 1e-164 | A0A022Q916_ERYGU; Uncharacterized protein | ||||
STRING | Migut.F00242.1.p | 1e-167 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11743 | 19 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24110.1 | 2e-36 | WRKY DNA-binding protein 30 |
Link Out ? help Back to Top | |
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Phytozome | Migut.F00242.1.p |
Entrez Gene | 105971727 |