PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.F00031.1.p | ||||||||
Common Name | LOC105964084, MIMGU_mgv1a013180mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 229aa MW: 26075.1 Da PI: 10.0432 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.2 | 4.9e-34 | 16 | 137 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 lp GfrFhPtdee++v+yLk+k+ + +l++ ++i+e+d++++ PwdLp + +++ yfF+kr+++ t+ + + t+ gyWka gkdk++ Migut.F00031.1.p 16 LPIGFRFHPTDEEVLVHYLKRKIYSLPLPA-SAIPEFDVFQSTPWDLPGDL---REKRYFFCKRKRSPLTKCNGSSfGTDCGYWKAIGKDKQI 104 699***************************.88***************544...4578********99998888887899************* PP NAM 93 lskkgel.vglkktLvfykgrapkgektdWvmheyr 127 ++ +++l +g+kk++vf +++ +kt+W+mhe Migut.F00031.1.p 105 IAPGSNLiIGIKKSFVFR---QRRDQKTQWIMHELC 137 **9555449********7...455568*******76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-41 | 14 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 42.048 | 16 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-21 | 17 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MEKAKPEDGN GGGVKLPIGF RFHPTDEEVL VHYLKRKIYS LPLPASAIPE FDVFQSTPWD 60 LPGDLREKRY FFCKRKRSPL TKCNGSSFGT DCGYWKAIGK DKQIIAPGSN LIIGIKKSFV 120 FRQRRDQKTQ WIMHELCLVG SINTPFLAQK LMMQLGDWVV CRVHQRKRKA RNHGKLVDSK 180 KSRNLQMNLR MEEGKNEMGV SISCSSGITD TPTNELDQEE ESSHSVRF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-28 | 14 | 167 | 13 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.F00031.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844037.1 | 1e-172 | PREDICTED: NAC domain-containing protein 68 | ||||
TrEMBL | A0A022QZ79 | 1e-170 | A0A022QZ79_ERYGU; Uncharacterized protein | ||||
STRING | Migut.F00031.1.p | 1e-171 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13250 | 13 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 8e-45 | NAC domain containing protein 83 |
Link Out ? help Back to Top | |
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Phytozome | Migut.F00031.1.p |
Entrez Gene | 105964084 |