PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01090.3.p
Common NameLOC105956914, MIMGU_mgv1a002904mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 628aa    MW: 70004.2 Da    PI: 6.0368
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01090.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.6e-13425472355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+h   Er+RR++iN++f  L +l+P+      +K +K++iL +++eY++ L+
  Migut.E01090.3.p 425 RNHVLSERKRREKINERFMILGSLVPSG-----GKADKVSILDHTIEYLRGLE 472
                       579999********************98.....8***************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.6E-5415198IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.202422471IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-17425489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.48E-13425476No hitNo description
PfamPF000105.5E-11425472IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.0E-18426487IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-16428477IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009957Biological Processepidermal cell fate specification
GO:0010091Biological Processtrichome branching
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MAGGDQDQKR VLEKLRKQLA LAVRSIQWSY GIFWSISAKK HGALEWGDGY YNGDIKTRKT  60
VQTVEVDTDQ LGLQRSDQLR ELYESLSLGE VIPQPKRPTA ALSPEDLTDA EWYFLVCMSF  120
VFNVGQGLPG KTLAKNGTVW LRNAHRADTK VFSRSLLAKS ASIKTIVCFP HLDGVVELGT  180
TELVPEDRNL VQHVKTSFLE GLSEDFPDVP TNSTDLDCEV LDHAITDCGD VEVSSPESSS  240
GDFADNLLRE ESNNLIDDID KEASQMMSWQ FKDEANSNNG PNNSTSSSDC VSQTRENHAT  300
AVPFSDVKIH ENQECNNSNN NNNNNNNNNN NVHYESVLSS LLKSSSQLML GPHVRNGNKE  360
SSFTGWDIIS CCKTHTTTVG APQSLLKKVL FEVGKMHESY RIENGKKDEK NEEEISKPEV  420
DEVDRNHVLS ERKRREKINE RFMILGSLVP SGGKADKVSI LDHTIEYLRG LERKVEELES  480
NKESTEVEST TQSKSHDAIE RTSDNYGPTK TDNSNKRPLT NSKRKACDLD KTGPANRRVR  540
LKDSSTDSVT IKISDKDVLI ELRCIWRESV LSEVMEAVNK LNLHSQTVQS SNSDGIFSMS  600
IKAKCKGVKS ASPSVMRQAL QKVIRKC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A5e-17131987192Transcription factor MYC3
4rqw_B5e-17131987192Transcription factor MYC3
4rs9_A5e-17131987192Transcription factor MYC3
4yz6_A5e-17131987192Transcription factor MYC3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1430435ERKRRE
2431436RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01090.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0111421e-107KJ011142.1 Erythranthe lewisii basic helix-loop-helix transcription factor (ANbHLH1) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836276.10.0PREDICTED: transcription factor EGL1
TrEMBLA0A022RE760.0A0A022RE76_ERYGU; Uncharacterized protein
STRINGMigut.E01090.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.11e-155bHLH family protein