PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.E00731.2.p | ||||||||
Common Name | LOC105964685, MIMGU_mgv1a011539mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Dof | ||||||||
Protein Properties | Length: 278aa MW: 30410.8 Da PI: 8.6511 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125 | 2.4e-39 | 29 | 89 | 3 | 63 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 + +++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss Migut.E00731.2.p 29 KVIINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 89 45789****************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-24 | 24 | 80 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.2E-33 | 32 | 86 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.04 | 32 | 86 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 34 | 70 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
MDTASAQWPQ DIATCPKQST VERKAQKEKV IINCPRCNST NTKFCYYNNY SLSQPRYFCK 60 TCRRYWTEGG SLRNIPVGGG SRKNKRSSSS SSSSSNSKIK VIPNQDLVIP PQNPNLNKIH 120 DILENNINNQ DLNLGFSMND FKTINEMIRV PSFDIKELQL NPCSSSSSSF PSSVVTSNNS 180 IITDPIITST VNYNSPLGFS SLMMPAGQFK SSDLNFSIDG LGSNYGSFQG AEEQNGKVLF 240 PFEVLKNRDS SNANDANRSD HHAATGYWNG VIGGGGS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.E00731.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844647.1 | 0.0 | PREDICTED: dof zinc finger protein DOF4.6-like isoform X2 | ||||
TrEMBL | A0A022S1W5 | 0.0 | A0A022S1W5_ERYGU; Uncharacterized protein | ||||
STRING | Migut.E00731.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46590.1 | 2e-35 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.E00731.2.p |
Entrez Gene | 105964685 |