PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.E00337.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 21629.2 Da PI: 6.6885 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.3 | 1.2e-10 | 69 | 113 | 4 | 52 |
AP2 4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52 GVr++k g+++A I d ++ +kr++lg+f tae A a+ +++ Migut.E00337.1.p 69 AGVRRRK-FGKFAAVINDpFK----KKRVWLGTFNTAEAASVAYLSKKRE 113 59**999.9*********662....5**********99999998776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 14.223 | 67 | 125 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-12 | 68 | 114 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 7.6E-6 | 68 | 79 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.7E-15 | 69 | 113 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.9E-6 | 69 | 103 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.1E-7 | 70 | 131 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.55E-14 | 70 | 107 | No hit | No description |
PRINTS | PR00367 | 7.6E-6 | 90 | 106 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MKFRVTYPDP DATDSSSDEI ESTQIKSKTK AHEFIVDKAK FLHKIANFSG ENPMGSVSSN 60 KLTGKSSLAG VRRRKFGKFA AVINDPFKKK RVWLGTFNTA EAASVAYLSK KREFDQKLLT 120 HRRFDWVHEN ETSDEIGGAA AVEEEVSSGN QPDEEFGFFN GVQVFDRYGY LVGEFSKIDD 180 LRIHIDENGV FC* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 90 | RRKFGKFAAVINDPFKKKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.E00337.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012846035.1 | 1e-140 | PREDICTED: ethylene-responsive transcription factor ERF117-like | ||||
TrEMBL | A0A022QU02 | 1e-121 | A0A022QU02_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49120.1 | 6e-16 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.E00337.1.p |