PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00117.1.p
Common NameLOC105974817, MIMGU_mgv1a012337mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 254aa    MW: 29282.7 Da    PI: 4.6271
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00117.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.35.6e-1850103356
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       k+++++++q++ Le+ F  ++++  +++ +LAk++gL+ rqV +WFqNrRa++k
  Migut.E00117.1.p  50 KKRRLKPDQVRFLEKSFDLENKLEPDRKIQLAKEVGLQPRQVAIWFQNRRARYK 103
                       56689************************************************9 PP
2HD-ZIP_I/II117.38.4e-3849140192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       ekkrrl+ +qv++LE+sF+ e+kLep+rK +la+e+glqprqva+WFqnrRAR+ktk lEk++++Lk++yd+lk+e +++ +++++L++e++
  Migut.E00117.1.p  49 EKKRRLKPDQVRFLEKSFDLENKLEPDRKIQLAKEVGLQPRQVAIWFQNRRARYKTKILEKEHSSLKANYDKLKQEYDAVFAQNQKLKDEVN 140
                       69**************************************************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.24E-1740104IPR009057Homeodomain-like
PROSITE profilePS5007116.74645105IPR001356Homeobox domain
SMARTSM003893.1E-1748109IPR001356Homeobox domain
CDDcd000863.84E-1550105No hitNo description
PfamPF000463.0E-1550103IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.9E-1852112IPR009057Homeodomain-like
PRINTSPR000311.9E-57685IPR000047Helix-turn-helix motif
PROSITE patternPS00027080103IPR017970Homeobox, conserved site
PRINTSPR000311.9E-585101IPR000047Helix-turn-helix motif
PfamPF021831.3E-11107146IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MEGSIWASNS SPSFHGSASM VNFEEFRDNN KNKNNNSNEE LDGSFHQSEK KRRLKPDQVR  60
FLEKSFDLEN KLEPDRKIQL AKEVGLQPRQ VAIWFQNRRA RYKTKILEKE HSSLKANYDK  120
LKQEYDAVFA QNQKLKDEVN LLREKVVVKE ECDNFEEKTP FLCGDIEAAA ATSDVFDSDN  180
YSSDVFETDN LSVSEFSQKD ESLRMAGLLL LQPATSCLPK LEMVEEFFDD LQPNSCNLGF  240
PIQDQLGTWL WQF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14954KKRRLK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00117.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855432.10.0PREDICTED: homeobox-leucine zipper protein ATHB-54-like
SwissprotP0CJ655e-38ATB54_ARATH; Homeobox-leucine zipper protein ATHB-54
TrEMBLA0A022Q5I20.0A0A022Q5I2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8252495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-38homeobox 1