PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.E00078.1.p | ||||||||
Common Name | LOC105974835, MIMGU_mgv1a012228mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 258aa MW: 29905.5 Da PI: 7.534 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.1 | 9.6e-55 | 11 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+v+yL+++++++++++ +vi+e+diyk++Pw+Lp+k++ +ekewyfFs+rd+ky++g r+nra+ sgyWkatg+dk ++ Migut.E00078.1.p 11 LPPGFRFHPTDEELIVYYLRNQASSNPCPV-SVIHEIDIYKFDPWELPEKAEVGEKEWYFFSPRDRKYPNGARPNRAAVSGYWKATGTDKGIY 102 79****************************.99***************99999**************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++ vg+kk+Lvfykg+ pkg ktdW+mheyrl Migut.E00078.1.p 103 S-GSKYVGVKKSLVFYKGKPPKGIKTDWIMHEYRL 136 *.999****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.29E-66 | 7 | 164 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.421 | 11 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-27 | 12 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MFGENISSDQ LPPGFRFHPT DEELIVYYLR NQASSNPCPV SVIHEIDIYK FDPWELPEKA 60 EVGEKEWYFF SPRDRKYPNG ARPNRAAVSG YWKATGTDKG IYSGSKYVGV KKSLVFYKGK 120 PPKGIKTDWI MHEYRLSESI RPLPNKQNGS MRLDDWVLCR IYKKKNPTRN TEQRVEETFD 180 RFVTSNDATS EQDQQASMKF PRTCSLTHLW EFDCMASISQ LLDENIAYNF PFNNQETSIS 240 NNGPHKYQTG QVQIHDY* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
3swm_B | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
3swm_C | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
3swm_D | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
3swp_A | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
3swp_B | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
3swp_C | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
3swp_D | 4e-73 | 6 | 166 | 15 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.E00078.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012855451.1 | 0.0 | PREDICTED: NAC transcription factor 29-like | ||||
Swissprot | K4BNG7 | 1e-119 | NAP2_SOLLC; NAC domain-containing protein 2 | ||||
TrEMBL | A0A022Q5B9 | 0.0 | A0A022Q5B9_ERYGU; Uncharacterized protein | ||||
STRING | Migut.E00078.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-106 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Migut.E00078.1.p |
Entrez Gene | 105974835 |
Publications ? help Back to Top | |||
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