PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D02423.1.p | ||||||||
Common Name | MIMGU_mgv1a008377mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 387aa MW: 43733.9 Da PI: 5.0648 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.4 | 1.4e-49 | 34 | 159 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l pGfrF+Ptdeel+++yLkkk+ g + e+ evi+evdi+++ePwdLp ++v ++++ew+fFs+r +ky++g++++rat+ gyWkatgk++ v Migut.D02423.1.p 34 LFPGFRFSPTDEELIQYYLKKKLLGFDEEV-EVIPEVDICRHEPWDLPaQAVIESDNEWFFFSPRGRKYPNGSQSKRATEFGYWKATGKERGV 125 579************************888.99***************667777899************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127 +s +++l+g+k+tLvf++grapkg++t+W+mhey Migut.D02423.1.p 126 KS-GSNLIGTKRTLVFHTGRAPKGQRTEWIMHEYC 159 **.9******************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.09E-55 | 27 | 175 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.859 | 34 | 176 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-25 | 36 | 159 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009626 | Biological Process | plant-type hypersensitive response | ||||
GO:0009910 | Biological Process | negative regulation of flower development | ||||
GO:0034976 | Biological Process | response to endoplasmic reticulum stress | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence Send to blast |
MGADNEAELV TFPVSRNAGN NISMEISLAE ASSLFPGFRF SPTDEELIQY YLKKKLLGFD 60 EEVEVIPEVD ICRHEPWDLP AQAVIESDNE WFFFSPRGRK YPNGSQSKRA TEFGYWKATG 120 KERGVKSGSN LIGTKRTLVF HTGRAPKGQR TEWIMHEYCT SEKSDDAMVV CRLRKNRDFH 180 LNDDNARRNS PGDRDLDLAE VNLSSGEQIG MLEGAKECSS SYNSHSVEQV DNGSESDDKI 240 TKGSSESSHN KGYDKEEDCY ADIMKDDIIK LDEDSSLIEN AVPLRVVTLK QKSEMKSNQP 300 STEASVSSQG TANRRLRLRN QRVESYQPEN FEIHKFSAKD IPIEDSLDFG ARTRRGSLSL 360 FAVLVVLILL ILIFFFTRDF WLKIIP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-43 | 33 | 177 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-43 | 33 | 177 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-43 | 33 | 177 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-43 | 33 | 177 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
3swm_B | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
3swm_C | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
3swm_D | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
3swp_A | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
3swp_B | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
3swp_C | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
3swp_D | 3e-43 | 33 | 177 | 19 | 169 | NAC domain-containing protein 19 |
4dul_A | 3e-43 | 33 | 177 | 16 | 166 | NAC domain-containing protein 19 |
4dul_B | 3e-43 | 33 | 177 | 16 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in plant cell division. {ECO:0000269|PubMed:16803883}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D02423.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012850367.1 | 0.0 | PREDICTED: NAC domain-containing protein 89-like | ||||
Refseq | XP_012850368.1 | 0.0 | PREDICTED: NAC domain-containing protein 89-like | ||||
Swissprot | Q94F58 | 8e-84 | NAC89_ARATH; NAC domain-containing protein 89 | ||||
TrEMBL | A0A022QFK1 | 0.0 | A0A022QFK1_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D02423.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4154 | 22 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22290.1 | 5e-79 | NAC domain containing protein 89 |
Link Out ? help Back to Top | |
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Phytozome | Migut.D02423.1.p |
Publications ? help Back to Top | |||
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