PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02232.1.p
Common NameMIMGU_mgv1a008576mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 305aa    MW: 34158.8 Da    PI: 8.8289
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02232.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA603e-19206239134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C++C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  Migut.D02232.1.p 206 CTHCEVTKTPQWREGPLGPKTLCNACGVRYRSGR 239
                       *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004011.1E-14200250IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.741200236IPR000679Zinc finger, GATA-type
SuperFamilySSF577168.55E-15202263No hitNo description
Gene3DG3DSA:3.30.50.102.6E-14204237IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.38E-15205252No hitNo description
PROSITE patternPS003440206231IPR000679Zinc finger, GATA-type
PfamPF003204.3E-17206239IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MSMIEAGNCW DTVLNGTVGG DEFENVLRYF DFPMEDIEVA DNGFLADWDI SNSHCLGPIP  60
HDVAIEPPNV PDCKIDTRPP YIFPDRVSPP ATQQSSKISD AREQKKPISQ TLKLNKPIEI  120
QSPVSVLESN AATSALPKNL PTNHGRVIPV GPRSKRARRA PANPWHFISP LFASKETTKD  180
NNERRFRKIP AKEYSEKSMQ KHPKKCTHCE VTKTPQWREG PLGPKTLCNA CGVRYRSGRL  240
YPEYRPAASP TFAPSLHSNS HKKVIEMRNK GKFPTNIFEE PPISPQPEFV PNPMGSSYLN  300
DYIN*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00130DAPTransfer from AT1G08010Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02232.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827911.10.0PREDICTED: GATA transcription factor 7
TrEMBLA0A022PVJ00.0A0A022PVJ0_ERYGU; Uncharacterized protein
STRINGMigut.D02232.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31342149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-43GATA transcription factor 11