PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01938.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 637aa    MW: 72486.2 Da    PI: 9.8043
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01938.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.3e-07430471347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE +  ++  +++G++ Wk  a ++g  + + ++k+ w+ +
  Migut.D01938.1.p 430 KWTQEELDMVIKHQAEHGNK-WKPLADELG--KHRAHLKDTWRRL 471
                       8*******************.********9..6778999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.039354425IPR001005SANT/Myb domain
SMARTSM007170.13427474IPR001005SANT/Myb domain
SuperFamilySSF466894.0E-7428489IPR009057Homeodomain-like
CDDcd001670.00925430472No hitNo description
Gene3DG3DSA:1.10.10.602.6E-5430482IPR009057Homeodomain-like
PROSITE profilePS500906.69430472IPR017877Myb-like domain
PfamPF139212.6E-9431489No hitNo description
PROSITE profilePS500906.679473541IPR017877Myb-like domain
SMARTSM007170.15477543IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-5483543IPR009057Homeodomain-like
PROSITE profilePS500906.783543596IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MGKEGASENA TPKIEKRIKT KSKKVKKNEE TTTEMQDAQS IDTEKAVKHV RISEKEDIAE  60
TEVERVHKRD KNKKKNKESK DIEADINKDA GEGKSTVAYD EGGSGDAVEN AVSKRKKREK  120
NKNKNDGLEM ENGSEAKGNE GKKRESTSGT NSTKEASKER KKQKGKRKLE EVDFEKEGEK  180
DVKEAGRDKQ NKEKKRKKDK QKSKDGDLSS LQKENAPDNV DGDIQPISDA ENVTKEVKRK  240
DKKENKKKEN SKDDSSAASQ QNSVDKDGTK KDKSKDGKKR KKKGTKSVEN VSDGAQDNGV  300
DASKGKKNKR KKSAECGSDN PTPNKSNKKV RFSEKNEVFT LPSVPDTGEG DLVRGKRFTL  360
EEDEMVKQSV YNYIEYNDLG DEGLDMVLNC SKHPKLKGCW KEIASAIPYR PTEAIYFRAH  420
ILFRRSDNRK WTQEELDMVI KHQAEHGNKW KPLADELGKH RAHLKDTWRR LKLQNQNKGH  480
WSQKEHQKLF DLVNLDLQLK VNEEKKSKHG MLRDNICWTA VSDNLATRQS AVCCLKWYSQ  540
LTSPMVAQGI WSDTDDYRMV DALYGLDATC KEDVDWDSLV EGRSGDLCLK RWNQMTLHIG  600
GYARKSFAEQ VEVLAKRYCP HLIEVREAWD NKPRVP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114119RKKREK
2270281KDKSKDGKKRKK
3277281KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01938.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825770.0AC182577.2 Erythranthe guttata clone MGBa-93F4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829315.10.0PREDICTED: cylicin-1-like
TrEMBLA0A022PS770.0A0A022PS77_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10291429
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-125MYB_related family protein