PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01937.1.p
Common NameMIMGU_mgv1a003135mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 628aa    MW: 73234.1 Da    PI: 9.3615
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01937.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.82.2e-07421460345
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwq 45 
                       +WT+eE e+++++++ + ++ Wk+ a ++g  +    k++++ w 
  Migut.D01937.1.p 421 KWTPEEYEKILNYHENHDNE-WKALADELGehQ----KHVRNTWC 460
                       8*******************.*********544....89998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.021345416IPR001005SANT/Myb domain
SMARTSM007178.8418465IPR001005SANT/Myb domain
SuperFamilySSF466893.02E-7420480IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-9421473IPR009057Homeodomain-like
PROSITE profilePS500906.411421463IPR017877Myb-like domain
PfamPF139213.4E-10422480No hitNo description
PROSITE profilePS500907.677464532IPR017877Myb-like domain
SMARTSM007170.49468534IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-7474536IPR009057Homeodomain-like
PROSITE profilePS500906.911534587IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MDEECVAENV TRKIEKRAKK KSNKCKRSEE NTIGMQEGRG IVTVKAIEHV QISEKEDVTE  60
MERVRKRDKE KKKNKEIEIK KGAGESEQTA AYGEESSGDA VDNAVKKRKK REKDKNRNGM  120
FETGINKEVE GKESKRWSEG ESVSGTTCSK ERKTKKPKRN HDNGDSEKEK EDGNEVGTRK  180
QNSKIPVERK KRKKEKIVSE DDNCWQESSD KAKHVEGDLS SMQKENVPGN VESVSYVGNA  240
TKELKRKKKK KKKSKERESF NADSVDKHTI NDDTQIDGVE YGNKRKKKKK AELVENSSDD  300
ARDTQVEYAS KGKKRKTKTV ENDSDDRISD TNDENRNVKQ DDLVRGKRFT LDEDNIVKES  360
VYKYIHERQL GDEGLNMVLN CKKHPEIKGC WREIASAIPY RPYLSIYFRA QVLLRRSVFR  420
KWTPEEYEKI LNYHENHDNE WKALADELGE HQKHVRNTWC RIKMRDMNRG RWSQEEYQKL  480
FDLVNVDLRS KVSQVKRSQH GMFRDNISWT MISEQLSTRP QARCCSKWYS QLTSRMVAEG  540
VWADSDDYRL IDALYSLDAT CVEDVDWDSL VEERSGIFCR KRWSQMVMHI GQNTRKSFSE  600
QVEILARRYC PSLLEAREAW DSKPYVD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188194RKKRKKE
2188195RKKRKKEK
3189193KKRKK
4244252KRKKKKKKK
5283289KRKKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01937.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825770.0AC182577.2 Erythranthe guttata clone MGBa-93F4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829324.10.0PREDICTED: cyclin-D-binding Myb-like transcription factor 1
TrEMBLA0A022PN870.0A0A022PN87_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10291429
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-111MYB_related family protein