PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D01687.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

NAC

Protein Properties

Length: 345aa MW: 40375.5 Da PI: 6.9527

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D01687.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	47.2	7.2e-15	11	95	1	79
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk 79 lp+G+rF+P+d+el+ +yL +kv +k+++ + v i+ + yk P+ + k + +e+ewyfF+++ kk+a+++++ ++ + Migut.D01687.1.p 11 LPVGYRFRPNDDELMEYYLGNKVLDKPVPGKGVktIDADEFYKDPPHIIVKkynpLSEIGEREWYFFVRHVKKTANKQQEGKKEE 95 799**********************88855442555556666666664434543344999**********99988877543 PP
2	NAM	28.6	4.1e-09	247	315	67	128
NAM 67 kya........tgkrknr.atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ ++k+ +r + gyWk+tg ++ +++ ++++ k ++fykg g+ t W+m+ey++ Migut.D01687.1.p 247 KNQenkatideENKNVRRvGDRIGYWKSTGIKEYIINGdNNKVFAFKIHFTFYKG---IGKITPWTMDEYHF 315 33312222221233444433569*********999856677899***65...5677******95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-14	7	98	IPR003441	NAC domain
PROSITE profile	PS51005	12.611	11	164	IPR003441	NAC domain
Pfam	PF02365	7.6E-11	12	314	IPR003441	NAC domain
PROSITE profile	PS51005	11.512	177	337	IPR003441	NAC domain
SuperFamily	SSF101941	1.57E-11	268	336	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence Send to blast
MGCEFRYVNE LPVGYRFRPN DDELMEYYLG NKVLDKPVPG KGVKTIDADE FYKDPPHIIV 60 KKYNPLSEIG EREWYFFVRH VKKTANKQQE GKKEEIVDDE NKRVLLEQKK ENQENNAITV 120 LLEQNEKNQE KEEIVDDENK RVLLEQIKKN QENNATVLLE QNEKNQEKEE IVDNENKRVL 180 LEQNKKDQET KATVLLEGSK KNQENNKATV LLQGSKKNQE NKATVSLEGS KTSQENKATF 240 LLDGSKKNQE NKATIDEENK NVRRVGDRIG YWKSTGIKEY IINGDNNKVF AFKIHFTFYK 300 GIGKITPWTM DEYHFLKSPN QENQRMDEWV LIKIMRGKDY NKCC*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence Send to blast

MGCEFRYVNE LPVGYRFRPN DDELMEYYLG NKVLDKPVPG KGVKTIDADE FYKDPPHIIV  60
KKYNPLSEIG EREWYFFVRH VKKTANKQQE GKKEEIVDDE NKRVLLEQKK ENQENNAITV  120
LLEQNEKNQE KEEIVDDENK RVLLEQIKKN QENNATVLLE QNEKNQEKEE IVDNENKRVL  180
LEQNKKDQET KATVLLEGSK KNQENNKATV LLQGSKKNQE NKATVSLEGS KTSQENKATF  240
LLDGSKKNQE NKATIDEENK NVRRVGDRIG YWKSTGIKEY IINGDNNKVF AFKIHFTFYK  300
GIGKITPWTM DEYHFLKSPN QENQRMDEWV LIKIMRGKDY NKCC*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D01687.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012853886.1	0.0	PREDICTED: myb-like protein X
STRING	Migut.D01687.1.p	0.0	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	4e-11	NAC-like, activated by AP3/PI

Link Out ? help Back to Top
Phytozome	Migut.D01687.1.p