PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01647.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 308aa    MW: 35144.1 Da    PI: 5.0503
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01647.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.71.3e-1997157259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       dDg+ WrKYGq  v ++ +pr+ Y C ++   gC++ k+v+r ++dp ++ +tY+g+H ++
  Migut.D01647.1.p  97 DDGHPWRKYGQYRVLNASYPRHHYSCKHKgsqGCRALKHVQRIEDDPPLFRTTYRGQHSCK 157
                       8**************************998889*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-2083157IPR003657WRKY domain
SuperFamilySSF1182903.01E-1990157IPR003657WRKY domain
PROSITE profilePS5081120.09491155IPR003657WRKY domain
SMARTSM007741.6E-2196158IPR003657WRKY domain
PfamPF031067.6E-1997157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MESSSSEPRE QLSDYDAHDS NTTTLDMLQP FPEIEDSFFF NLENQQPINE FKSTLDFLQQ  60
NVESLRAKAS VIREGLINNA RGKRKIYQQI YTCALFDDGH PWRKYGQYRV LNASYPRHHY  120
SCKHKGSQGC RALKHVQRIE DDPPLFRTTY RGQHSCKDFL NSESSHQIIM DAAAAQEDDS  180
SLVMVAAATK EDSFVIWKQS AVIRSDKTLI KQEANEDCNR VESSPLDSGN WDALSSIGTD  240
HGDLIGSVRV RNWLVEVNIV ETRFLELENE VKSRGLEENM GRIEALNERV EMLVEESGRF  300
GKFRLDA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-1696157869OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01647.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853944.10.0PREDICTED: uncharacterized protein LOC105973466
TrEMBLA0A022Q4J90.0A0A022Q4J9_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.D01647.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-21WRKY DNA-binding protein 70