PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D01555.1.p | ||||||||
Common Name | MIMGU_mgv1a021220mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WOX | ||||||||
Protein Properties | Length: 362aa MW: 40185.2 Da PI: 6.0472 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 70.3 | 2.4e-22 | 83 | 142 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ Migut.D01555.1.p 83 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQQITAQLrrygKIEGKNVFYWFQNHKARERQ 142 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 116.1 | 1.6e-37 | 82 | 144 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ Migut.D01555.1.p 82 SSRWNPTPEQLQTLEELYRRGTRTPSAEQIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKR 144 79***********************************************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00389 | 1.5E-5 | 80 | 147 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 4.0E-9 | 83 | 142 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 4.0E-20 | 83 | 142 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 2.48E-12 | 83 | 146 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 1.09E-6 | 84 | 144 | No hit | No description |
PROSITE profile | PS50071 | 11.483 | 88 | 143 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0048513 | Biological Process | animal organ development | ||||
GO:0099402 | Biological Process | plant organ development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence Send to blast |
MMWMMGCNDG GDFDSIQDPF TGRKLRPLMP RPAATAAAAA ASTPPCFAAR IHGTDLLALN 60 HHLAAMAEQN KRELNTQQVV VSSRWNPTPE QLQTLEELYR RGTRTPSAEQ IQQITAQLRR 120 YGKIEGKNVF YWFQNHKARE RQKRRRHLES LCDEHQPHHH NNNNNIQIND TAQKRQEPAA 180 GGNRTAFEVE QTKNWASLTN SSTTNPEKSG EMAAECKLGS DGWVQFDEED ENDDPDETQQ 240 RRNATWQMMH LSCSSSISPT TLHSSLTSSS AATPTMEMHH HHHPDFINIF FDPHQNLGRS 300 GGGGGGGGGV IEETQTLQLF PLESSGGGGG GGQDEEEEEG WAGVNSVTPP YKFFEFLPVK 360 N* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D01555.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012853221.1 | 0.0 | PREDICTED: WUSCHEL-related homeobox 1-like | ||||
TrEMBL | A0A022QA43 | 0.0 | A0A022QA43_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4681 | 23 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 6e-45 | WUSCHEL related homeobox 1 |
Link Out ? help Back to Top | |
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Phytozome | Migut.D01555.1.p |