PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Migut.D01224.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 29376.2 Da PI: 10.1195 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.1 | 3.6e-09 | 138 | 184 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y++sLq Migut.D01224.1.p 138 HSLAERVRRERISERMKLLQSLVPAC----HKVTGKALMLDEIIHYVQSLQ 184 999**********************9....566*****************9 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 5.24E-10 | 131 | 188 | No hit | No description |
SuperFamily | SSF47459 | 2.62E-16 | 131 | 199 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.945 | 133 | 183 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-15 | 134 | 197 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.2E-6 | 138 | 184 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.4E-10 | 139 | 189 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 260 aa Download sequence Send to blast |
MAAFSSSTSS SPIFLPNNPT IMNNNMFALL DYIQPNNALS SFGNNNNNNN NNNNNNNQAS 60 SLVTDYYYNK HTPNPIPMNK NRKSSPKQTS SPNSAHSKKQ KKKRENNGEE KKKKNQEEEE 120 KKGYIHVRAR RGQATDRHSL AERVRRERIS ERMKLLQSLV PACHKVTGKA LMLDEIIHYV 180 QSLQNQVEFL SMKLASVNPL FYDFGMDLES SFMVGHIQQN LTPLPSMKEC IMDNSVNSLL 240 LQQPQINPLN NAVPQVIST* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Migut.D01224.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012852587.1 | 0.0 | PREDICTED: transcription factor bHLH75-like | ||||
Swissprot | Q93W88 | 1e-48 | BH137_ARATH; Transcription factor bHLH137 | ||||
TrEMBL | A0A022QDC5 | 1e-119 | A0A022QDC5_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.D01224.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4116 | 23 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-46 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Migut.D01224.1.p |
Publications ? help Back to Top | |||
---|---|---|---|
|