PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00370.1.p
Common NameLOC105952643, MIMGU_mgv1a010915mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 298aa    MW: 31153 Da    PI: 6.046
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00370.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.83.8e-08146190554
                       HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri ++   L+el+P+ +      K + a+++ + v+Y+k L
  Migut.D00370.1.p 146 HSIAERLRRERIAERVRALQELVPSvN------KTDRATMVDEIVDYVKFL 190
                       99***********************55......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.06E-10139195No hitNo description
SuperFamilySSF474596.15E-14139200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.44141190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.8E-13143200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-5146190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-9147196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0031347Biological Processregulation of defense response
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MANNPGETTS DDFLEQILGF PGYASGADGN DGGSAAMMLQ LGSGDGSSHL GAMGVGLGIG  60
GGGYGVGSGG SGFPLGLSLE QGKGGFNDAS GSGKRFLRDD LVDSRGSSLK SGFHGQPMTN  120
TVPSGPHPPA IRPRVRARRG QATDPHSIAE RLRRERIAER VRALQELVPS VNKTDRATMV  180
DEIVDYVKFL RLQVKVLSMS RLGGAGAVAP LVTDVPISTI EEEGNEGGRA QPAWEKWSND  240
GTERQVAKLM EENVGAAMQF LQSKALCIMP ISLASAIYHT QPPDTPTLMK PESNPPS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150155RLRRER
Functional Description ? help Back to Top
Source Description
UniProtRequired for ovule fertilization. {ECO:0000269|PubMed:15634699}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00370.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831677.10.0PREDICTED: transcription factor UNE12
SwissprotO227681e-123UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A022S2E70.0A0A022S2E7_ERYGU; Uncharacterized protein
STRINGMigut.D00370.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57992434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.28e-99bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]