PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00274.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 378aa    MW: 43136.1 Da    PI: 7.1584
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00274.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.1e-09231283355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++ +++rrRR ri ++++ L+el+P++   +sk   K++ L  +++++k+Lq
  Migut.D00274.1.p 231 EKAIAADRRRRLRISHGLDALQELVPHSKEIRSKEAAKMALLDGVIDHVKYLQ 283
                       677899*********************85667777*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.6E-10225292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.10E-9226287No hitNo description
SuperFamilySSF474591.96E-10227291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.973228282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-7230283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-8234288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MLQLALPHWY RVCYTHTHTT YHARIPRILA SKHTLISLQF SFSPHVFGIS SPELNHCTVK  60
PFRNLSSMEE QNHENRLQFL PLPINWMAHN ASGLYSDRDA NEHYTMTPGV NGIYPEFFPV  120
PQWVHPPQIP QNYVEFLTER GYHEISRQMP YDITKQVPGS TLVGPPQLEE YLRPHNERNF  180
VTAFTGSEDQ PGIQKQNRKN EESSNAFQAY SGSGAASSKG TSEARRKRSK EKAIAADRRR  240
RLRISHGLDA LQELVPHSKE IRSKEAAKMA LLDGVIDHVK YLQCQLKDLC QNRLGSEPIS  300
NSLIFFEGHG HYMLKDQMLS GPLEEVMGKL IDFYPSAATE LLQSRGLIVM PMTYAEELIE  360
PTEMLDMQEN CPFMTIK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225240RKRSKEKAIAADRRRR
2226241KRSKEKAIAADRRRRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00274.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832524.10.0PREDICTED: uncharacterized protein LOC105953408
TrEMBLA0A0H3Y7N01e-105A0A0H3Y7N0_SALMI; Basic helix-loop-helix transcription factor
TrEMBLA0A4D9A7V31e-105A0A4D9A7V3_SALSN; Uncharacterized protein
STRINGMigut.D00274.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA96461617
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.11e-11LJRHL1-like 1