PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01797.1.p
Common NameLOC105963849, MIMGU_mgv1a009333mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 346aa    MW: 38417.6 Da    PI: 6.5804
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01797.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30186244259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver+++dp ++++tY+ eHnh+
  Migut.B01797.1.p 186 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSDPGMFIVTYTAEHNHP 244
                       79************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-31175246IPR003657WRKY domain
SuperFamilySSF1182901.31E-26180246IPR003657WRKY domain
PROSITE profilePS5081135.508180246IPR003657WRKY domain
SMARTSM007741.6E-36185245IPR003657WRKY domain
PfamPF031061.2E-25187244IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MEDDWDLHAV VRGCAAICTT TTSTSAAAGE LTSTTSHGRV FSTLKQNCTS FKDLFEPRRE  60
SFVQELHELY RPFFPSSEES SSLKVIPSQN LPISPLSVLG GLQDLPSEHQ QKQQQQQQQQ  120
QQQQQHLQIM KQLPPPTHLR QKQQAFSVAN CSPKASVISH PPPPRSKRRK NNLKRVCHVA  180
AENLSSDMWS WRKYGQKPIK GSPYPRGYYR CSTSKGCLAR KQVERNRSDP GMFIVTYTAE  240
HNHPIPAHRN SLAGSTRNKQ AETPISDDPN KQPTSSSPEK MESSRDDDLA EAAADEDDDE  300
FSISEMALDE DFFAGLEDIT ATDSGECSGQ FSVQLPWLST ITGGG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-20171246379Disease resistance protein RRS1
5w3x_D4e-20171246379Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01797.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843783.10.0PREDICTED: WRKY transcription factor 22
TrEMBLA0A022QU070.0A0A022QU07_ERYGU; Uncharacterized protein
STRINGMigut.B01797.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-58WRKY family protein